| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3668 |
|---|
| Symbol | |
|---|
| ID | 7268203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4461921 |
|---|
| End bp | 4462562 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643568474 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002464940 |
|---|
| Protein GI | 219850507 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA TTCTGTTGGT CGATGATCAT GCAGTCTTGC GAGCCGGATT ACGCTTGTTG
CTCGAATCGC AACCTGATAT GGTTGTGGTT GGCGAAGCAG AAGACTCGCG CACAGCGATC
ACGCAGGCAA CCACACTCCA ACCTGACCTG ATTCTCCTCG ATCTGAGCTT GACCAACAGC
AGTGGCCTTG CTGCCATCCA ATCGTTGCGA GCGGCTGCAC CGCAGGCGCG CATTCTCGTA
TTGACAATGC ACGACGACGA GGGCTACGTG CGACAAGCAT TAGCAGCCGG AGCGCATGGG
TATGTTTTAA AGCGTGCTGC TGACGCCGAG TTGATCGCAG CGATCCGTGC TGTATTGCGG
GGTGAGCTGT ATATCCATCC CGCCCTCACC CGTCGCTTGC TTGAGGATAT CTTGCCGCAA
CCACAACCGA CTAATCCGTG GGAAAGCCTG AGCGAGCGCG AGCGAGAGGT GTTGGTATTA
GTTGCGCGTG GCTACACCGC AGCCGAAATT GCCGGTCAGT TGAACCTCAG CCCCAAAACG
GTCGAAACCT ACCGTACCCG CGGTATGGAA AAGCTCGGCC TTCGCTCACG AGCTGCGCTT
GTCCAGTTTG CGCTCGACCA CAACTTGCTC GTTCCCCCAT AG
|
|---|
| Protein sequence | MSGILLVDDH AVLRAGLRLL LESQPDMVVV GEAEDSRTAI TQATTLQPDL ILLDLSLTNS
SGLAAIQSLR AAAPQARILV LTMHDDEGYV RQALAAGAHG YVLKRAADAE LIAAIRAVLR
GELYIHPALT RRLLEDILPQ PQPTNPWESL SEREREVLVL VARGYTAAEI AGQLNLSPKT
VETYRTRGME KLGLRSRAAL VQFALDHNLL VPP
|
|---|
| |