| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0043 |
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| Symbol | |
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| ID | 6207689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 54100 |
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| End bp | 54804 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641689664 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001816934 |
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| Protein GI | 182411868 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.14113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA ATCCCGACCC CGAAAACTCG CCGGCGGCGA GCAGCACTCC GACGAAGAGT
CGCGTCTTCC TGGTCGACGA TCACCCCATC ACGCGCCAAG GCGTGGCGGT TTTGATCAAT
CAGGAGCGCG ATCTGATGGT GTGCGGCGAG GCCGATAGCG CGCCCGTTGC GATCGACCTG
ATCCAGAAGC TTTCCCCCGA TGTGGCTTTG GTGGACATCA CGCTCAAGAC GACGAGCGGG
ATCGAGTTGA TGAAACACCT GAAGGCGCTC CGGCCGGAGA TGCCGGTGCT GATCATGAGC
ATGCATGACG AGAGCCTGTT CGCCGAGCGC GCGCTCCGCG CCGGCGCCAA GGGCTACATC
ATGAAGCACG AGGCCAGTGC GAAGATCCTC ACGGCGATCC GCCGCGTCCT TTCCGGCGAA
CTTTATCTCA GCGACAAGAT GAAGGAGAAG ATGCTGCACC GGCTGGTGAA CAACCGGAAG
GAGGAGGTCG TCTTCTCGAT CGACACGCTG AGCGATCGCG AGATGGAGGT GTTTCAGCTG
ATCGGCAACG GCTATGGCAC ACGTCAGATC GCCTCGAAGC TCAACCTTAG CGTGAAGACG
ATCGATTCCT ATCGCGAGCA CCTGAAGCTG AAGCTGCGGC TGGAGAGCGG CACCGAACTC
GTCCGCCACG CCATTCAGTG GGTGAAGAGC GAAGGTCTGG TCTGA
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| Protein sequence | MKTNPDPENS PAASSTPTKS RVFLVDDHPI TRQGVAVLIN QERDLMVCGE ADSAPVAIDL
IQKLSPDVAL VDITLKTTSG IELMKHLKAL RPEMPVLIMS MHDESLFAER ALRAGAKGYI
MKHEASAKIL TAIRRVLSGE LYLSDKMKEK MLHRLVNNRK EEVVFSIDTL SDREMEVFQL
IGNGYGTRQI ASKLNLSVKT IDSYREHLKL KLRLESGTEL VRHAIQWVKS EGLV
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