Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3790 |
Symbol | |
ID | 3969477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4213437 |
End bp | 4214117 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637926899 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_533643 |
Protein GI | 90425273 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGA AAGCTAGTCC CTCGCGCCTC CGGATCTTTC TTGCCGACGA TCACCCCGTC GTCCTGAGCG GCATGAAGAC CCTCATCGCG GCGGACGATG GTCTGGAAAT GGTCGGCGAA GCCACCGATG GTCCGGAGGC TTTGCGCTCG GCGCTCGAGT TGAAGCCGGA CGTTGCGGTT TTCGACCTGT CGATGCCCGG CATGAACGGC ATCGATGTGG CGCAGAAATT TCTCGCGGCG CGGCCGGATG CGCGGGTGTT AGTTCTGTCG GTGCACGAGG ATGGCGTCTA TCTGCGGCGA CTGCTTAAAC TCGGCGTCGC CGGTTACATC CTGAAGCGTT CGGCGTCGGA CGAACTGATC CGCGGCATCC ATGCGGTGGC CAATGGCGGC ATCTATCTCG ACCCTGCGAT TGCCGGCCAG GCGCTCGGGC GCCCCGCACC GATGGCGCCT GCGGGCAACG AGACCAGCGC GATTTCGGAG CTCAGCACGC GCGAACTCGA GGTGCTGCGA CTGGCATCAG TGGGTCATAG CAACAAGGTG ATTGCAATAC GGCTTCAGGT CGGCCCCAAG AGCGTCGAGA CCTACAAGGC CCGAGCAATG GAAAAACTTG GATTCTCCAG CCGCGTCGAA CTGATACGCT TCGCGCTGAG CATGGGCTGG CTCGACGCCG CAGATCTTTG A
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Protein sequence | MDQKASPSRL RIFLADDHPV VLSGMKTLIA ADDGLEMVGE ATDGPEALRS ALELKPDVAV FDLSMPGMNG IDVAQKFLAA RPDARVLVLS VHEDGVYLRR LLKLGVAGYI LKRSASDELI RGIHAVANGG IYLDPAIAGQ ALGRPAPMAP AGNETSAISE LSTRELEVLR LASVGHSNKV IAIRLQVGPK SVETYKARAM EKLGFSSRVE LIRFALSMGW LDAADL
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