Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3262 |
Symbol | |
ID | 5540760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4236790 |
End bp | 4237458 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895381 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001433332 |
Protein GI | 156743203 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.764026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCA TGCCTATCCG TATTCTGCTG GCCGATGATC ATCGCATGTT CCGCCAGGGA CTGCGCGAAC TGCTTGAGCG CAAAGGCGGG TTCATCATCG TTGGCGAGGC GTCAACCGGG CGCGAGGTGC TGGCGCAGGC GGCAGCGCTG CGCCCGGACA TCGTGCTGCT CGATATTCAG ATGCCGGAGA TCGATGGCGT CGCTGTCGCG CGGCAACTGG CGCAGACGCA CCCGGATGTC AAGGTCATTA TGCTGACAAT GTATCGCCAG GATCAGCATC TGTTCGAGGC GATCAAAGCC GGGGCGCGCG CCTATCTGCT GAAGGACGCC GACGCCGACG AATTGATTGA TGTGATCGAA CGGGTGCATC GCGGCGAAGC GGCGCTTGAT CCGACCGTCA CGCTGCGGGT ATTCGATGAG TTTCGCCGGT TGAGCATCGA TCAGGACGCC GAACAACTGA CAGAGCGTGA GCGCGATATT CTCACACTCC TGGCTGAAGG GCATGACAAT CGCACGATTG CGCAACGCCT GTTTCTGTCG GAGAAGACCG TTGGCAACCG CCTGAGCGAG ATTTTCCAGA AACTCGGCGT CAGCAACCGT ACCCAGGCTG CGCTGGTGGC GGTACAGCGT GGATTGATTG CACCACCCAA ACCGGACTCG ACCGAATAG
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Protein sequence | MSTMPIRILL ADDHRMFRQG LRELLERKGG FIIVGEASTG REVLAQAAAL RPDIVLLDIQ MPEIDGVAVA RQLAQTHPDV KVIMLTMYRQ DQHLFEAIKA GARAYLLKDA DADELIDVIE RVHRGEAALD PTVTLRVFDE FRRLSIDQDA EQLTERERDI LTLLAEGHDN RTIAQRLFLS EKTVGNRLSE IFQKLGVSNR TQAALVAVQR GLIAPPKPDS TE
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