| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4449 |
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| Symbol | |
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| ID | 3912264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5033940 |
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| End bp | 5034632 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637886351 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_488043 |
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| Protein GI | 86751547 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.683214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA AATCACCGAA CCCACCCCAT GGCTCACGTT TGCGGATCTT TCTCGCCGAC
GATCATCCGA TTGTTCTGAG TGGGATGAAG ATGCTCGTCG CCGAAGATCC CGAACTCGAG
CTGGTCGGCG AGGCCAATGA CGGACCCAAG GCGCTGCGGC GCGCCATCGA GCTGAGGCCC
GACGTCGCGG TGTTCGATCT GTCGATGCCG GGCATGAACG GAATTGACGT CACCGAGAAG
TACCTCGAGG CGCAGCCGAA GGCGCGCGTG CTCGTCCTAT CGGTGCACGA GGATGGTGCT
TATCTGCGGC GGCTGCTCAA AATGGGCGTC GGCGGCTACA TCCTCAAGCG CTCGGCGACC
GACGAACTGA TCCGCGGCAT CCACGCCGTC GCAGCCGGCG GGTTGTATCT CGATCCGGCG
ATCGCGGGGC GCGCCATCGG TCGGGGCGTC CAGCAGGTGT CCATCGACAG CGAAACCAGC
CCGATCTCGG AGCTCAGCAC CCGCGAGCTG GAAGTCCTGC GGCTGGCCTC TGTCGGCCAC
AGCAACAAGG TGATCTCCGC CAAACTCCAG GTCGGTTCCA AGAGCGTCGA GACCTACAAG
GCGCGCGCCA TGGACAAACT CGGTTTCACC AACCGGGTCG AGTTGATCCG CTTCGCTCTC
AGCATGGGCT GGCTGGAGAG CGCGGAGCCG TGA
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| Protein sequence | MDAKSPNPPH GSRLRIFLAD DHPIVLSGMK MLVAEDPELE LVGEANDGPK ALRRAIELRP
DVAVFDLSMP GMNGIDVTEK YLEAQPKARV LVLSVHEDGA YLRRLLKMGV GGYILKRSAT
DELIRGIHAV AAGGLYLDPA IAGRAIGRGV QQVSIDSETS PISELSTREL EVLRLASVGH
SNKVISAKLQ VGSKSVETYK ARAMDKLGFT NRVELIRFAL SMGWLESAEP
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