More than 300 homologs were found in PanDaTox collection
for query gene Mext_4343 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_4343  response regulator receiver  100 
 
 		 236 aa  468  1.0000000000000001e-131  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4712  two component transcriptional regulator, LuxR family  100 
 
 		 236 aa  468  1.0000000000000001e-131  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.37561  normal  1 
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  88.56 
 
 		 236 aa  422  1e-117  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  47.3 
 
 		 223 aa  188  5.999999999999999e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  44.91 
 
 		 220 aa  177  2e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  43.64 
 
 		 222 aa  172  5e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  41.05 
 
 		 222 aa  167  2e-40  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  40.61 
 
 		 222 aa  166  4e-40  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  40.61 
 
 		 222 aa  165  6.9999999999999995e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  41.2 
 
 		 221 aa  163  2.0000000000000002e-39  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  43.64 
 
 		 228 aa  163  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  42.86 
 
 		 228 aa  162  4.0000000000000004e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  42.67 
 
 		 228 aa  161  7e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  43.78 
 
 		 223 aa  160  2e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  40.27 
 
 		 232 aa  157  2e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  37.96 
 
 		 215 aa  154  8e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  41.78 
 
 		 213 aa  153  2e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  37.44 
 
 		 226 aa  152  4e-36  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  40.91 
 
 		 218 aa  152  5e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  41.36 
 
 		 218 aa  152  5e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  40.91 
 
 		 218 aa  152  5e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  40.18 
 
 		 233 aa  152  5e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  38.29 
 
 		 230 aa  149  4e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  38.29 
 
 		 230 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.55 
 
 		 218 aa  144  1e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  36.36 
 
 		 212 aa  143  2e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  38.74 
 
 		 214 aa  142  5e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.99 
 
 		 213 aa  139  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  37.39 
 
 		 235 aa  139  3.9999999999999997e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  34.88 
 
 		 217 aa  139  4.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  38.94 
 
 		 212 aa  137  2e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  37.92 
 
 		 243 aa  135  7.000000000000001e-31  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  36.82 
 
 		 219 aa  134  9.999999999999999e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  33.48 
 
 		 223 aa  133  1.9999999999999998e-30  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_014148  Plim_3764  response regulator receiver  36.74 
 
 		 217 aa  134  1.9999999999999998e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.321181  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.79 
 
 		 216 aa  133  3e-30  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  34.91 
 
 		 206 aa  132  3.9999999999999996e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  36.62 
 
 		 206 aa  132  5e-30  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.11 
 
 		 218 aa  131  7.999999999999999e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.43 
 
 		 206 aa  131  9e-30  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  36.56 
 
 		 232 aa  130  1.0000000000000001e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  36.04 
 
 		 226 aa  130  1.0000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  32.86 
 
 		 221 aa  130  2.0000000000000002e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  34.8 
 
 		 216 aa  130  2.0000000000000002e-29  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  35.09 
 
 		 232 aa  129  4.0000000000000003e-29  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  35.59 
 
 		 224 aa  129  4.0000000000000003e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  36.49 
 
 		 215 aa  129  5.0000000000000004e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.51 
 
 		 216 aa  129  5.0000000000000004e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  35.75 
 
 		 232 aa  128  6e-29  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  31.53 
 
 		 229 aa  128  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  32.72 
 
 		 219 aa  128  8.000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  40 
 
 		 217 aa  128  8.000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  37.21 
 
 		 220 aa  128  8.000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  35.32 
 
 		 219 aa  128  9.000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  35.65 
 
 		 215 aa  128  1.0000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  37.61 
 
 		 215 aa  127  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  30.3 
 
 		 264 aa  127  1.0000000000000001e-28  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  37.61 
 
 		 215 aa  127  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  37.61 
 
 		 215 aa  127  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  40 
 
 		 218 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  36.15 
 
 		 215 aa  126  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  34.58 
 
 		 215 aa  126  3e-28  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  33.96 
 
 		 217 aa  126  3e-28  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.49 
 
 		 218 aa  125  6e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  33.81 
 
 		 209 aa  125  6e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  32.26 
 
 		 219 aa  125  8.000000000000001e-28  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  38.89 
 
 		 224 aa  125  8.000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  31.75 
 
 		 216 aa  124  9e-28  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.26 
 
 		 213 aa  124  1e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.02 
 
 		 216 aa  124  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  32.46 
 
 		 224 aa  124  1e-27  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  39.25 
 
 		 222 aa  124  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  35.98 
 
 		 214 aa  124  1e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.21 
 
 		 214 aa  124  1e-27  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  34.27 
 
 		 203 aa  124  1e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  31.8 
 
 		 219 aa  124  1e-27  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  34.86 
 
 		 210 aa  124  1e-27  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.72 
 
 		 221 aa  124  2e-27  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  35.1 
 
 		 215 aa  124  2e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  36.54 
 
 		 214 aa  123  2e-27  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  34.4 
 
 		 215 aa  123  2e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  35.1 
 
 		 215 aa  124  2e-27  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  35.1 
 
 		 215 aa  124  2e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  35.21 
 
 		 214 aa  124  2e-27  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  34.56 
 
 		 215 aa  123  3e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.028731 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.39 
 
 		 213 aa  123  3e-27  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  33.48 
 
 		 242 aa  123  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  33.94 
 
 		 215 aa  122  4e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  33.95 
 
 		 213 aa  122  4e-27  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  37.96 
 
 		 228 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  33.94 
 
 		 215 aa  122  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.55 
 
 		 216 aa  122  4e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  36.32 
 
 		 217 aa  122  5e-27  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  34.86 
 
 		 215 aa  122  5e-27  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  37.04 
 
 		 208 aa  122  5e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.49 
 
 		 214 aa  122  6e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  33.64 
 
 		 215 aa  122  7e-27  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  36.06 
 
 		 220 aa  122  7e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.88 
 
 		 215 aa  121  8e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  35.58 
 
 		 215 aa  121  8e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
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