| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1984 |
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| Symbol | |
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| ID | 5208946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2465430 |
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| End bp | 2466092 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595592 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001276321 |
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| Protein GI | 148656116 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.178457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.123783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGTG AAATTCGTAT TCTCCTCGCC GACGACCATC GCATGTTTCG TCAGGGGTTG
CGCGAACTGC TGGAGCGCAA AGCAGGATTC GTCATCGTCG GCGAAGCGTC CACCGGACGC
GAGGTGCTGG CGCAGGTTGC AGCGCTTCAG CCCGACATTG TGCTGCTCGA TATTCAGATG
CCGGAGATCG ACGGTGTCGC CGTGGCGCGT CAACTTGCCC AATCGCACCC GGAGGTCAAG
ATCATTATGC TGACCATGTA TCGTCAGGAT CAGCACCTGT TCGAAGCCAT CAAAGCCGGT
GCGCGCGCCT ATCTGCTGAA AGATGCCGAC GCCGACGAAC TGATCGACGT GATCGAGCGG
GTGTATCGCG GTGAGGCGGC GCTCGATCCA ACCGTGACGT TGAAGGTATT CGATGAGTTT
CGTCGCCTGA GTGTTGATCA GGATGCCGAA CAGTTGACAG AGCGCGAACG GGACATTCTC
ACCCTCCTGG CGGCTGGCTA CGACAACCGC ACCATCGCGC AGCGCCTGTT TCTTTCGGAA
AAGACGGTCG GCAACCGCCT GAGTGAGATC TTCCAGAAAC TTGGGGTCAG CAATCGCACG
CAGGCGGCGC TGGTTGCCGT GCAGCGCGGC CTGATCGCTC CGCCGAAACC GGAGGCGGAG
TGA
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| Protein sequence | MSSEIRILLA DDHRMFRQGL RELLERKAGF VIVGEASTGR EVLAQVAALQ PDIVLLDIQM
PEIDGVAVAR QLAQSHPEVK IIMLTMYRQD QHLFEAIKAG ARAYLLKDAD ADELIDVIER
VYRGEAALDP TVTLKVFDEF RRLSVDQDAE QLTERERDIL TLLAAGYDNR TIAQRLFLSE
KTVGNRLSEI FQKLGVSNRT QAALVAVQRG LIAPPKPEAE
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