More than 300 homologs were found in PanDaTox collection
for query gene Caci_7105 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  100 
 
 
241 aa  471  1e-132  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  63.84 
 
 
225 aa  264  1e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  63.8 
 
 
226 aa  262  4.999999999999999e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  60.99 
 
 
226 aa  246  2e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  58.37 
 
 
247 aa  243  9.999999999999999e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  58.82 
 
 
221 aa  238  5e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  58.72 
 
 
235 aa  238  6.999999999999999e-62  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.14 
 
 
226 aa  234  8e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.11 
 
 
222 aa  234  9e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.08 
 
 
221 aa  234  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  58.11 
 
 
221 aa  232  4.0000000000000004e-60  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  55.86 
 
 
224 aa  232  4.0000000000000004e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.95 
 
 
228 aa  231  5e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  56.31 
 
 
224 aa  231  6e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  57.85 
 
 
222 aa  231  9e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  55.8 
 
 
229 aa  230  2e-59  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.36 
 
 
215 aa  230  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.95 
 
 
225 aa  229  4e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  54.22 
 
 
218 aa  228  7e-59  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  57.85 
 
 
222 aa  226  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  55.71 
 
 
221 aa  226  3e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  54.22 
 
 
227 aa  226  3e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.36 
 
 
230 aa  225  4e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.47 
 
 
224 aa  225  5.0000000000000005e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  55 
 
 
225 aa  225  5.0000000000000005e-58  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.07 
 
 
221 aa  224  8e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.19 
 
 
226 aa  224  9e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.45 
 
 
225 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  55.2 
 
 
217 aa  223  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.7 
 
 
221 aa  223  2e-57  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.18 
 
 
218 aa  223  2e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  55.2 
 
 
225 aa  222  3e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55 
 
 
216 aa  223  3e-57  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  57.92 
 
 
217 aa  223  3e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  58.11 
 
 
302 aa  223  3e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  55.31 
 
 
232 aa  220  9.999999999999999e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  55.2 
 
 
225 aa  221  9.999999999999999e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  54.34 
 
 
217 aa  219  3.9999999999999997e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  51.05 
 
 
231 aa  218  5e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.63 
 
 
239 aa  218  6e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  53.81 
 
 
224 aa  218  6e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.05 
 
 
220 aa  217  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  54.5 
 
 
228 aa  217  2e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  53.36 
 
 
233 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.34 
 
 
230 aa  216  2e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  53.39 
 
 
227 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  51.98 
 
 
226 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  54.34 
 
 
215 aa  216  2.9999999999999998e-55  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.15 
 
 
218 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  56.44 
 
 
219 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  51.56 
 
 
231 aa  216  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  51.8 
 
 
224 aa  215  4e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.45 
 
 
221 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.21 
 
 
236 aa  215  4e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.39 
 
 
220 aa  215  5e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.02 
 
 
229 aa  215  5.9999999999999996e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.89 
 
 
225 aa  215  5.9999999999999996e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  53.33 
 
 
226 aa  214  7e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  54.02 
 
 
220 aa  214  9e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.49 
 
 
220 aa  214  9e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.33 
 
 
250 aa  214  9.999999999999999e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.55 
 
 
221 aa  214  9.999999999999999e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52.19 
 
 
230 aa  213  1.9999999999999998e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.44 
 
 
230 aa  213  1.9999999999999998e-54  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  53.39 
 
 
226 aa  213  2.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  42.86 
 
 
261 aa  212  3.9999999999999995e-54  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.57 
 
 
234 aa  211  7.999999999999999e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  52.65 
 
 
225 aa  211  9e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  52.94 
 
 
223 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  52.29 
 
 
217 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  53.85 
 
 
225 aa  210  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  52.19 
 
 
235 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  51.35 
 
 
223 aa  209  3e-53  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  56.36 
 
 
220 aa  209  3e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.42 
 
 
226 aa  209  3e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.74 
 
 
242 aa  209  4e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  49.77 
 
 
220 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  51.12 
 
 
226 aa  208  5e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.6 
 
 
223 aa  208  6e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.19 
 
 
261 aa  208  7e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  55.61 
 
 
218 aa  208  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  55.51 
 
 
224 aa  208  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  52.91 
 
 
226 aa  208  8e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  52.47 
 
 
236 aa  208  8e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  51.14 
 
 
241 aa  207  9e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.57 
 
 
226 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  53.88 
 
 
214 aa  207  1e-52  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  52.02 
 
 
220 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.19 
 
 
215 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.43 
 
 
239 aa  207  2e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  52.81 
 
 
239 aa  207  2e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  52 
 
 
223 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.9 
 
 
234 aa  206  4e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  51.79 
 
 
225 aa  205  4e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  54.09 
 
 
224 aa  206  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  48.37 
 
 
248 aa  206  4e-52  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  53.14 
 
 
244 aa  206  4e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.73 
 
 
222 aa  205  5e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  49.1 
 
 
221 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.02 
 
 
225 aa  204  8e-52  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
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