Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1198 |
Symbol | |
ID | 5338025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1048829 |
End bp | 1049506 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001360950 |
Protein GI | 152965166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.109916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0247339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTCCG CACCAGCCGT CCGGGCCGTG GTCGTCGACG ACCAGGCGAT GATCCGGGCC GGGTTCTCGG CGCTGCTGGA CGCCCAGCCC GGCGTCGAGG TCGTCGGGCA GGCCGCCGAC GGGGAGGAGG CCGTCGAGGT CGTCACCGCG ACCACCCCCG ACGTCGTGCT CATGGACGTC CGGATGCCCG TCCTCGACGG GCTGGAGGCG ACCCGGCGGA TCCTCGCCGC CGGGCTCGAC CCGGCCCCGC GGGTGCTGGT GCTGACGACC TTCGACGTCG ACGACTACGT GTTCTCCGCC CTGCAGGCCG GGGCCAGCGG GTTCCTGCTC AAGGACGCGA CCCCGGAGGT CCTGGTCGAC TCCGTCCGCG CCGTCGCCCG GGGCGACTCG CTGCTCGCCC CGGGGATCAC CCGGCGCCTC ATCGAGCACT TCGTCTCGAC CCGCCGGCGC GCGGTGGACG TCCCCGCCGC CCTGGCCGAC CTCACCCCGC GCGAGCGCGA GGTCCTGGTC TGCATCGCCC GCGGGCTGTC CAACCAGGAG ATCGCCGCGG AGCTGTTCAT CGCCGAGCAG ACGACCAAGA CGCACGTCAG CCGCGTCCTC ACCAAGCTGG GGCTGCGCGA CCGCGTCCAG GCCGTCGTGC TCGGCTACGA GATCGGGCTG GTCAGCCCCG GCCGGTGA
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Protein sequence | MSSAPAVRAV VVDDQAMIRA GFSALLDAQP GVEVVGQAAD GEEAVEVVTA TTPDVVLMDV RMPVLDGLEA TRRILAAGLD PAPRVLVLTT FDVDDYVFSA LQAGASGFLL KDATPEVLVD SVRAVARGDS LLAPGITRRL IEHFVSTRRR AVDVPAALAD LTPREREVLV CIARGLSNQE IAAELFIAEQ TTKTHVSRVL TKLGLRDRVQ AVVLGYEIGL VSPGR
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