| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2842 |
|---|
| Symbol | |
|---|
| ID | 9146750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3157119 |
|---|
| End bp | 3157799 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003637925 |
|---|
| Protein GI | 296130675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.622781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00305681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCG TGCTGCTGGT GGACGACCAG CCGCTGCTGC GGACGGGGTT CCGGCTCGTC
GTCGAGAGCG AGCCGGACCT CGAGGTGGTC GGCGAGGCCG CCGACGGCCG CGTCGCGCTC
AGCCAGGTCG CGGGCCTGGC ACCCGACGTC GTGCTCATGG ACATCCGCAT GCCCGGCATG
GACGGCGTCG AGGCGACCCG GCGCATCGTC GCCGAGCACC CCGACTCCCG GGTGCTCGTG
CTGACGACGT TCGACGTCGA CGACCTCGCC TTCGCGGCGC TGCGCGCCGG CGCGAGCGGG
TTCCTGCTGA AGTCCGCGCG CCCCGACGAG CTCGTCGACG CGATCCGCAC GGTCGCCGCC
GGCACGTCCG TGGTCGCGCC GCGCGTGCTG CGCCGCATGC TCGACCTGTT CGCCCCGCAC
CTCCCGGCCG GTGCCGAGGA CGGCGACCCG CAGGAGCGCA CCGGCCCGCA CCCGCGGCTG
CGCGGCCTGA CCCCGCGCGA GCTCGACGTG CTGCGGCTCA TCGCCGAGGG CGCGTCCAAC
GCCGAGATCG CCGCGGAGCT CGTCGTCTCG GAGACCACCG TCAAGACGCA CGTCGGCAAC
GTCTTCGCCA AGCTCGGCGC GCGGGACCGC GTGCAGGCGG TGATCATCGC GTACGAGTGC
GGGGTCGTCA CCGCGTCCTG A
|
|---|
| Protein sequence | MTTVLLVDDQ PLLRTGFRLV VESEPDLEVV GEAADGRVAL SQVAGLAPDV VLMDIRMPGM
DGVEATRRIV AEHPDSRVLV LTTFDVDDLA FAALRAGASG FLLKSARPDE LVDAIRTVAA
GTSVVAPRVL RRMLDLFAPH LPAGAEDGDP QERTGPHPRL RGLTPRELDV LRLIAEGASN
AEIAAELVVS ETTVKTHVGN VFAKLGARDR VQAVIIAYEC GVVTAS
|
|---|
| |