Gene Sked_03540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03540 
Symbol 
ID8631992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp391757 
End bp392437 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content74% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003313155 
Protein GI269793700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG TCCTCCTCGT CGACGACCAG GCGCTCATCC GCATGGGCCT GCGCCTCGTC 
ATCGACTCCG AGCCCGACCT CGAGGTGGTC GGCGAGGCCT CGGACGGCGC CGTCGCCCTC
GACCAGGTCG CGGCGCTCGC CCCCGACGTG GTCCTCATGG ACATCCGCAT GCCCGGGGTC
GACGGCATCG AGGCGACCCG GCGGGTCGTC GCCGAGCACC CGGCCGTGCG GGTCCTCGTC
CTGACGACCT TCGACGTCGA CGAGTACGCC TTCGCGGCGC TGCGGGCCGG GGCGAGCGGG
TTCCTGCTCA AGAGCGCACG CCCCGAGGAG CTCGCCGACG CGATCCGCAC CATCGCGTCG
GGCAGCTCCG TCGTCGCGCC GCGCGTGGTG CGGCGGATGC TCGACCTCTT CGCCCCGCAC
CTGCCGGGCG GCGACGACGC GTCACCGGCC CGTCCCGACG AGGTCGCCCC TGTGCTGCGC
GACCTCACCC CGCGCGAGAC CGACGTGCTG CGGGCCGTGG CCGAGGGGCT GTCGAACGCC
GAGATCGCCG AGCAGCTCGT GCTCTCGACC ACCACGGTGA AGACCCACGT CGGCAACATG
CTCGCCAAGC TGGGTGTCCG CGACCGCGTC CAGGCCGTCA TCCTCGCCTA CGAGTCCGGC
CTCGTCCGCT CGCAGGGGTG A
 
Protein sequence
MTTVLLVDDQ ALIRMGLRLV IDSEPDLEVV GEASDGAVAL DQVAALAPDV VLMDIRMPGV 
DGIEATRRVV AEHPAVRVLV LTTFDVDEYA FAALRAGASG FLLKSARPEE LADAIRTIAS
GSSVVAPRVV RRMLDLFAPH LPGGDDASPA RPDEVAPVLR DLTPRETDVL RAVAEGLSNA
EIAEQLVLST TTVKTHVGNM LAKLGVRDRV QAVILAYESG LVRSQG