Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1951 |
Symbol | |
ID | 8333294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2207395 |
End bp | 2208075 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955100 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003112712 |
Protein GI | 256391148 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0924411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGC CGATCCGCAT CCTGCTGGCT GACGACCAGG CGCTGCTGCG GGGCACGTTC CGGCTGCTGC TGGACTCCAC TCCGGACTTC GAGGTCGTCG CCGAAGCCGG GGACGGCGCG GCGGCGGTGA AGCTGGCGCA GGAGCTGTGT CCGGATCTGG TGCTGATGGA CATCCGGATG CCGGTGCTCG ACGGGTTGGA GGCAACGCGG CTGATCGCGG CGGATCCGGC GCTGGGAAGC GTCAAGGTTC TGATTCTCAC GACGTTCGAG CAGGACGAGT ACGTCGCCGA GGCGTTGCGT GCCGGAGCCG GCGGGTTCCT CGGCAAGGGG GTGGATCCCG AGGAGTTGCT GCGGGCGATC CGCATCGTCG CCGGCGGCAA TTCGCTGCTC TCCCCCGCCG CCACGCGGGC GCTGATCGCC CGCTTCCTGG CTCAGCCCTC TGATACGGCG CCGACCGTCA GCGCTCCGTT GGACGCGCTG ACCGCACGGG AGTTGGAGGT CGTCACATTG GTCGCGACCG GGTTGTCGAA CGAGGAGATC GCCGGGCAGC TGTTCGTCAC GCCGCTGACG GCCAAGACGC ATGTGAACCG CGCGATGACG AAGCTCGGGG CGCGGGATCG GGCGCAGGTG GTCGTGATCG CGTACGAGTC GGGGCTGGTG CGTCCTGGAT CAGGGTACTG A
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Protein sequence | MSAPIRILLA DDQALLRGTF RLLLDSTPDF EVVAEAGDGA AAVKLAQELC PDLVLMDIRM PVLDGLEATR LIAADPALGS VKVLILTTFE QDEYVAEALR AGAGGFLGKG VDPEELLRAI RIVAGGNSLL SPAATRALIA RFLAQPSDTA PTVSAPLDAL TARELEVVTL VATGLSNEEI AGQLFVTPLT AKTHVNRAMT KLGARDRAQV VVIAYESGLV RPGSGY
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