More than 300 homologs were found in PanDaTox collection
for query gene Snas_0541 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  100 
 
 
221 aa  435  1e-121  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.42 
 
 
220 aa  221  6e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.23 
 
 
221 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.7 
 
 
215 aa  214  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  51.61 
 
 
220 aa  211  5.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.45 
 
 
226 aa  207  7e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50.9 
 
 
227 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.68 
 
 
222 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  50.23 
 
 
223 aa  205  5e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  51.13 
 
 
225 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  49.1 
 
 
241 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.45 
 
 
224 aa  204  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.4 
 
 
221 aa  204  7e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  52.47 
 
 
234 aa  203  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.31 
 
 
221 aa  203  2e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.42 
 
 
224 aa  203  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.16 
 
 
220 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  50.22 
 
 
226 aa  202  3e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  201  5e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  50.69 
 
 
226 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  50.68 
 
 
221 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  49.32 
 
 
223 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.55 
 
 
229 aa  199  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.11 
 
 
226 aa  199  3e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.57 
 
 
225 aa  199  3e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.19 
 
 
225 aa  199  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.85 
 
 
218 aa  198  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.77 
 
 
217 aa  198  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50.68 
 
 
219 aa  197  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.33 
 
 
229 aa  195  3e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  46.4 
 
 
231 aa  195  4.0000000000000005e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.23 
 
 
219 aa  195  4.0000000000000005e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  47.27 
 
 
215 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48.84 
 
 
216 aa  194  7e-49  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  49.33 
 
 
230 aa  194  7e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48.9 
 
 
226 aa  194  8.000000000000001e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  194  9e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  48.65 
 
 
228 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  48.88 
 
 
224 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  47.58 
 
 
231 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.69 
 
 
239 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  49.76 
 
 
215 aa  193  2e-48  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  44.86 
 
 
250 aa  192  3e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.39 
 
 
234 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  46.82 
 
 
221 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  49.32 
 
 
228 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  49.77 
 
 
218 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  49.77 
 
 
223 aa  192  4e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.32 
 
 
225 aa  191  5e-48  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.15 
 
 
230 aa  192  5e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.47 
 
 
218 aa  191  1e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  50.47 
 
 
302 aa  191  1e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  49.07 
 
 
213 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  46.79 
 
 
222 aa  190  2e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.95 
 
 
224 aa  190  2e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  49.77 
 
 
247 aa  189  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.17 
 
 
226 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.77 
 
 
234 aa  189  2e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  48.4 
 
 
225 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  49.77 
 
 
217 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  46.82 
 
 
224 aa  189  4e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  49.77 
 
 
217 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  49.13 
 
 
235 aa  189  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  49.54 
 
 
222 aa  188  7e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  47 
 
 
220 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.08 
 
 
225 aa  187  9e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.07 
 
 
215 aa  187  1e-46  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  46.61 
 
 
222 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  47.95 
 
 
230 aa  187  1e-46  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  48.18 
 
 
219 aa  187  1e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  44.49 
 
 
233 aa  186  3e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  42.86 
 
 
248 aa  185  4e-46  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47 
 
 
221 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  46.85 
 
 
226 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  46.12 
 
 
225 aa  185  6e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  47.95 
 
 
219 aa  184  7e-46  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  38.43 
 
 
261 aa  184  1.0000000000000001e-45  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  44.98 
 
 
234 aa  183  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  47.03 
 
 
230 aa  184  1.0000000000000001e-45  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.98 
 
 
227 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.76 
 
 
217 aa  184  1.0000000000000001e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  45.33 
 
 
226 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  47.71 
 
 
220 aa  183  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  47.22 
 
 
221 aa  184  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.25 
 
 
236 aa  183  2.0000000000000003e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  47.51 
 
 
228 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  46.36 
 
 
241 aa  182  2.0000000000000003e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  46.26 
 
 
235 aa  182  3e-45  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.32 
 
 
239 aa  182  3e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  47.14 
 
 
226 aa  182  5.0000000000000004e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  48.13 
 
 
214 aa  181  6e-45  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  44.98 
 
 
213 aa  181  6e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  49.07 
 
 
220 aa  181  7e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  47.93 
 
 
215 aa  180  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  47.03 
 
 
222 aa  180  1e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.12 
 
 
225 aa  181  1e-44  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  47.69 
 
 
241 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  44.64 
 
 
244 aa  180  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
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