Gene Sked_08490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08490 
Symbol 
ID8632485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp964295 
End bp965005 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003313634 
Protein GI269794179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.199706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.526513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCTCGACGC CGCCCCGCAC ATCCGCGTCG CGATCGTCGA CGACCAGCAG 
CTGCTCCGGG CGGGCTTCCG CATGGTCATC GACTCCCAGC CGGACCTCGA GGTGGTCGTC
GAGGCCGGCG ACGGTGCCCA GGCGGTGCGT CTGCTCACCG ACCACCCCGT CGACGTCGTG
CTCATGGACG TGCGCATGCC GACCATGGAC GGCCTCGTCG CGACCGCCCA GCTCACCGCC
CTGTGGGAGG CCCGCGGCGA CGAGGCACCT CGCATCATCG TGCTCACCAC CTTCGACCTC
GACGAGTACG CCCTCGAGGC CATCCGGTCG GGCGCGAGCG GGTTCCTGCT CAAGGACGCC
CCGCCCGAGG AGATGCTCGC CGCGATCCGC ACCGTCCACT CGGGCGACGC GGTCATCGCG
CCGTCGACCA CGCGGCGCCT GCTCGACCGG CTCGTCACGA CCCTCCCCGA GGAGCAGCTC
GTCGACTCCG GTCAGGCCTC GGCCGTCGAC TCGCTCACCG AGCGCGAGCG CGAGGTCCTC
GTGCTCATGG CGCGGGGGCG CGCCAACCAG GAGATCGCCT CCGACCTGTT CGTCGCCGAG
GCGACCATCA AGACCCACGT GGGCCGCATC CTGTCCAAGC TCGGCGCCCG CGACCGCGTC
CAGGCCGTGG TGACCGCGTA CGAGACCGGC CTGGTGCGCC CCGGGGAGTG A
 
Protein sequence
MTDTLDAAPH IRVAIVDDQQ LLRAGFRMVI DSQPDLEVVV EAGDGAQAVR LLTDHPVDVV 
LMDVRMPTMD GLVATAQLTA LWEARGDEAP RIIVLTTFDL DEYALEAIRS GASGFLLKDA
PPEEMLAAIR TVHSGDAVIA PSTTRRLLDR LVTTLPEEQL VDSGQASAVD SLTEREREVL
VLMARGRANQ EIASDLFVAE ATIKTHVGRI LSKLGARDRV QAVVTAYETG LVRPGE