| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6094 |
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| Symbol | |
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| ID | 8337457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7014083 |
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| End bp | 7014790 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959196 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003116790 |
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| Protein GI | 256395226 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.634688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.121163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCCAGG TACTCATCGC CGATGACCAA GCCTTGGTGC GCACCGGCTT CCGCATGATC
CTGGAGAACG CACCGGACAT GGAGGTCGTG GCCGAGGCCG CGGACGGCGC CGAAGCGGCG
ACACTGGCGC TCGACCTCCG GCCGGACATC GTCCTCATGG ACGTGCGGAT GCCCGAGACC
GACGGCGTCC AGGCGACCCG CCGAATCTGC GCCGAGCGCC CCGGCCATAC CAGGATCCTG
ATGCTGACCA CCTTCGACCT CGACGAGTAC GTCTACGCAT CCCTCCGAGC CGGAGCCAGC
GGCTTCCTCC TCAAGGACAC CCTCGCCGCC GACCTGCTCT CCGCGATCCG CACCGTGGCA
GCCGGCGACG CGGTGGTCGC CCCCAGCGTT ACCCGCCGCC TGCTGGAACG CTTCGTGGGC
ACGAACACCG CCGGCGCCAG CCCTACCGGC ACAACCGGCA CAACCGGCAC TGCCTCACTC
GCATCCGCCC TAGCCGCCGA CACCCTGACC GACCGCGAAC GCGAAGTCCT GGCCCACCTC
GCCCGCGGCC TGTCCAACAG CGAAATCGCA GCACACATCT ACATCGGCGA AGGCACCGTC
AAAACCCACG TCAGCCGCAT CCTCGCCAAA CTGGACCTCC GCGACCGAGT CCAAGCCGTC
GTCTACGCCT ACGAATCCGG CCTCGTCCGC GCCGGCACCC CCGACTGA
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| Protein sequence | MIQVLIADDQ ALVRTGFRMI LENAPDMEVV AEAADGAEAA TLALDLRPDI VLMDVRMPET
DGVQATRRIC AERPGHTRIL MLTTFDLDEY VYASLRAGAS GFLLKDTLAA DLLSAIRTVA
AGDAVVAPSV TRRLLERFVG TNTAGASPTG TTGTTGTASL ASALAADTLT DREREVLAHL
ARGLSNSEIA AHIYIGEGTV KTHVSRILAK LDLRDRVQAV VYAYESGLVR AGTPD
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