| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1616 |
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| Symbol | |
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| ID | 8332959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1836266 |
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| End bp | 1836946 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954766 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003112378 |
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| Protein GI | 256390814 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0231149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0629914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCC GCGTCCTGCT TGCCGACGAC CAGCCTCTGG TCCGTGCCGC TTTGGCGATG
GCGATCGCCG ACCTGCCCGA CATCGAGGTC GCCGGGGAGG CCGGCGACGG GCTGCACGCG
GTGCGGATGA CCCGCGAGCT GTGCCCCGAC GTGGTCGTCA TGGACATCCG CATGCCCGGG
ACCGACGGCA TCGAGGCGAC GCGGATGATC ACCGGCGGCG CCGGGAGCGC CCGGGTCATC
GTTCTGACGA CCTTCGACGA TGACGACAAC GTCTACAACG CGTTGCGCGC CGGTGCGTCG
GGATTCCTCG TCAAGGACAT GGCGGTCAGC GACATCCTCG CCGGCATCCG CGTGGTCGCC
GCCGGTGACG CGCTGATCGC CCCGAAGGTC ACCCGGCGCC TGATCGCGCA GTTCGCCAGC
CGTCCGCGTC CCGCGACCGC GCCGCCGACG GTGCCCGCGG CGCCTCCCCG CCGGATCGAG
GCGATCACCG GCCGCGAACG CGAGGCGCTG ACCTTCGTCG GCCGCGGACT GTCGAACGCC
GAGATCCAGG TCGCGATGGG CATCAGCGCC GCGACCGTCA AAACCTACGT GACCAGGCTG
CTCGCCAAGC TCGACGCCCG CGACCGCGCG CAGCTCGTCA TCGCCGCCTA CGAGAACGGC
CTCGTCACAC CTGGCGAGTA G
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| Protein sequence | MPVRVLLADD QPLVRAALAM AIADLPDIEV AGEAGDGLHA VRMTRELCPD VVVMDIRMPG
TDGIEATRMI TGGAGSARVI VLTTFDDDDN VYNALRAGAS GFLVKDMAVS DILAGIRVVA
AGDALIAPKV TRRLIAQFAS RPRPATAPPT VPAAPPRRIE AITGREREAL TFVGRGLSNA
EIQVAMGISA ATVKTYVTRL LAKLDARDRA QLVIAAYENG LVTPGE
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