| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2557 |
|---|
| Symbol | |
|---|
| ID | 8883752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2697341 |
|---|
| End bp | 2698015 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003511330 |
|---|
| Protein GI | 291300052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.231398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0978001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA CCGTGCTCAT CGCCGACGAC CAGGCCATGG TCCGCGCGGG CTTCGCCGCC
CTGCTCAACG CGCAGTCCGA CATCGACGTC GTCGGCGAAG CCGCCAACGG CCTGCTCGCC
CTCGAACTGA GTCGGCAGCA CCACCCCGAC GTCGTCCTCA TGGACGTTCG GATGCCCGAA
ATGGACGGAC TGGAGGCGAC CCGCCGTCTC CTGGGCGGCA ACGAGACCGA GTACCGCCCC
AAGGTCCTCA TGCTCACCAC CTTCGACATC GACGACTACA TCTACGAGGC GCTGCGCATC
GGCGCCAGCG GCTTCCTCCT CAAGGACTCG CCACCCGACG ACCTGACCGC CGCCGTGCGC
GTCATCGCCG CCGGGGAGGC GCTGCTGGCC CCGTCGGTGA CCCGCCGCCT CATCGCCGAG
TTCGCCCGCA CCCGGCCGAA AGCCACCGCC ACGTCCGCGA CGCTCGCGTC CCTGACCGAC
CGCGAGACCG AGATCCTCAC CCTCATCGCC CGGGGCCTGT CCAACCGCGA GATCGCGGGC
CGACTCGTCG TCGCCGAGCA GACCGTCAAG ACCCACGTCG GCCGGATCTT CGCCAAACTC
GGCCTGCGCG ACCGGGCCCA GGCCGTGGTG TGCGCCTACG AGACCGGCCT GGTGACGGCG
GGGGAGGACC GGTAA
|
|---|
| Protein sequence | MTITVLIADD QAMVRAGFAA LLNAQSDIDV VGEAANGLLA LELSRQHHPD VVLMDVRMPE
MDGLEATRRL LGGNETEYRP KVLMLTTFDI DDYIYEALRI GASGFLLKDS PPDDLTAAVR
VIAAGEALLA PSVTRRLIAE FARTRPKATA TSATLASLTD RETEILTLIA RGLSNREIAG
RLVVAEQTVK THVGRIFAKL GLRDRAQAVV CAYETGLVTA GEDR
|
|---|
| |