More than 300 homologs were found in PanDaTox collection
for query gene Snas_2557 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  443  1e-123  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  69.82 
 
 
221 aa  293  2e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  66.06 
 
 
218 aa  266  1e-70  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  61.88 
 
 
226 aa  265  5.999999999999999e-70  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  58.22 
 
 
226 aa  263  2e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  62.28 
 
 
228 aa  260  1e-68  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  60.36 
 
 
226 aa  258  5.0000000000000005e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  60.71 
 
 
227 aa  256  2e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  61.19 
 
 
225 aa  254  9e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  59.72 
 
 
225 aa  253  2.0000000000000002e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  61.09 
 
 
218 aa  252  3e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  57.21 
 
 
225 aa  246  2e-64  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  60.27 
 
 
215 aa  246  2e-64  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.76 
 
 
228 aa  245  4e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  57.53 
 
 
239 aa  243  1.9999999999999999e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  58.53 
 
 
218 aa  243  1.9999999999999999e-63  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.89 
 
 
229 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.18 
 
 
225 aa  242  3e-63  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  56.76 
 
 
221 aa  241  5e-63  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  59.09 
 
 
221 aa  240  1e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  58.11 
 
 
222 aa  240  1e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.9 
 
 
222 aa  240  1e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  56.68 
 
 
239 aa  239  2e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.53 
 
 
221 aa  239  2e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  59.55 
 
 
225 aa  240  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.75 
 
 
261 aa  239  2.9999999999999997e-62  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  55.45 
 
 
214 aa  239  2.9999999999999997e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.62 
 
 
215 aa  238  5e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  56.16 
 
 
225 aa  238  5e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  55.91 
 
 
218 aa  238  6.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  56.62 
 
 
230 aa  236  1e-61  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  57.21 
 
 
225 aa  236  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  57.8 
 
 
219 aa  235  3e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  57.21 
 
 
227 aa  235  5.0000000000000005e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  55.26 
 
 
234 aa  234  6e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  57.66 
 
 
227 aa  234  7e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  58.41 
 
 
247 aa  234  8e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  58.45 
 
 
225 aa  234  9e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  57.53 
 
 
219 aa  233  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  56.62 
 
 
230 aa  233  1.0000000000000001e-60  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  54.46 
 
 
222 aa  233  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  57.99 
 
 
221 aa  233  2.0000000000000002e-60  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  56.31 
 
 
220 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  58.26 
 
 
217 aa  233  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  59.07 
 
 
217 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  57.01 
 
 
226 aa  232  3e-60  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  56.42 
 
 
219 aa  231  5e-60  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  56.31 
 
 
241 aa  231  5e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  55.91 
 
 
220 aa  231  9e-60  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  55.61 
 
 
230 aa  230  1e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  59.45 
 
 
217 aa  230  1e-59  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.96 
 
 
220 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  55.66 
 
 
231 aa  230  1e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  57.92 
 
 
225 aa  230  2e-59  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  55.71 
 
 
228 aa  229  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  55.14 
 
 
221 aa  229  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.46 
 
 
224 aa  228  5e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  55.3 
 
 
234 aa  226  2e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  55.16 
 
 
228 aa  226  2e-58  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.1 
 
 
236 aa  226  2e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.34 
 
 
221 aa  226  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  57.53 
 
 
302 aa  226  3e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
229 aa  225  4e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  54.59 
 
 
217 aa  225  4e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.79 
 
 
224 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  56.05 
 
 
224 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  55.8 
 
 
223 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  53.68 
 
 
231 aa  222  4e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  54.19 
 
 
234 aa  222  4e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.84 
 
 
220 aa  222  4e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.46 
 
 
234 aa  222  4e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  50.9 
 
 
233 aa  221  4.9999999999999996e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  58.74 
 
 
224 aa  221  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  52.19 
 
 
233 aa  221  6e-57  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  48.24 
 
 
258 aa  221  8e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  54.67 
 
 
211 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  53.64 
 
 
220 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  54.3 
 
 
226 aa  218  3.9999999999999997e-56  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.88 
 
 
216 aa  218  5e-56  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.18 
 
 
241 aa  218  5e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  54.13 
 
 
219 aa  218  6e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.11 
 
 
223 aa  217  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  45.42 
 
 
261 aa  217  1e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  53.85 
 
 
225 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  53.42 
 
 
242 aa  217  1e-55  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  55 
 
 
223 aa  216  2e-55  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  51.34 
 
 
225 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  54.94 
 
 
244 aa  216  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  56.5 
 
 
217 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  53.88 
 
 
220 aa  215  4e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  51.69 
 
 
239 aa  215  5e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  215  5.9999999999999996e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  52.21 
 
 
226 aa  214  8e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  55.5 
 
 
216 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.6 
 
 
221 aa  214  9e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  53.1 
 
 
225 aa  214  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.66 
 
 
230 aa  213  1.9999999999999998e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  55.91 
 
 
220 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.94 
 
 
222 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  53.65 
 
 
235 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
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