Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4652 |
Symbol | |
ID | 9248534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5526502 |
End bp | 5527161 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003682544 |
Protein GI | 297563570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0949639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CGATCCGGGT CCTGGTCTGC GACGACCAGG TGCTGATCCG CACCGGCCTC GTCACCATCA TCGACGCCCA ACCCGACCTG GAGGTCGCCG GCGAGTGCGG GGACGGCGCG GCCGCCGTCG AACTCGCCGA GCGGCTGCGC CCCGACGTCG TGGTGATGGA CGTGCGCATG CCCGTGCTCG ACGGCATCGA GGCCACCCGG CGCCTGGCCG GGGCCGGGGT GGACCGTCCC GTCAAGGTCC TGGTGGTCAC GACGTTCAAC CTCGACGAGT ACGTCTACGA GGCGCTGCGC GCGGGCGCCA GCGGGTTCCT GCTCAAGGAC GCGCCCCCGG CCCAGCTGCT GCACGGCATC CGCACCGTGT CCACCGGCGC GGCCCTGCTG GACCCCGAGG TCACACGACA GCTGGTGGGC AGGTACGCCG CACGGATCCG GCCCCCCGAC GCCGCCGCGG CCGACGCCCG GCTGACCCCC CGCGAGCTGG AGGTCCTGCG CCTGATCGCC AACGGCCTGT CCAACGGCGA GATCGCCGCG AGCCTGTTCA TCAGCCAGGA GACCGTGAAG ACGTTCGTCT CGCGCATCCT GACCAAACTC GACCTGCGCG ACCGCGTCCA GGCCGTGGTC TACGCCTACC GGCAGGGGCT GGTGACCTGA
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Protein sequence | MSAPIRVLVC DDQVLIRTGL VTIIDAQPDL EVAGECGDGA AAVELAERLR PDVVVMDVRM PVLDGIEATR RLAGAGVDRP VKVLVVTTFN LDEYVYEALR AGASGFLLKD APPAQLLHGI RTVSTGAALL DPEVTRQLVG RYAARIRPPD AAAADARLTP RELEVLRLIA NGLSNGEIAA SLFISQETVK TFVSRILTKL DLRDRVQAVV YAYRQGLVT
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