| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1796 |
|---|
| Symbol | |
|---|
| ID | 5058255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2052466 |
|---|
| End bp | 2053158 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640474067 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_001158637 |
|---|
| Protein GI | 145594340 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG AGCCGGCGAC CAGCCCGGCC ATCCGGATCC TGCTCGCCGA CGACCACCAC
CTCGTGCGTA CCGGGTTCCG GGTCATCCTC GAGGTGGAGA GCGACATGCA CGTCGTCGGG
GAGGCCGCGG ACGGCGAACG GGCGGTGAGC ATGGCCGGGG CACTCCGCCC AGACGTGGTC
CTGATGGACG TGGAGATGCC CCGGGTCGAC GGGCTGGAGG CCACCCGACG GATCGTCGCG
GACGCGGACC GATCGAACGG ACCGGCGGTG TTGATCCTCA CCACCTTCGA CCGGGATGAC
TATCTGTTCG CCGCGCTTCG CGCCGGAGCA AGCGGATTCC TGCTGAAGAA CGGCACGCCG
GAGGCGCTCG TGGCGGCGAT CCGGGTGGTC GCTCGAGGCG AGGGTCTCAT CGCCCCCGAA
CTCACCCGGC GAGTGATCGC CGCCTTCGCC AGGCCGGGGG GCGAACCCAC GACGACGGCC
GTGGCGCTGT CGGACCTCAC GCCGCGGGAG CACGAGGTGC TGGTGCTGGT CGCCTCGGGC
GCGAGCAACG CCGAAATCGC GGCCAACCTA CGCCTCGGCG AAGCGACCGT GAAGACCCAT
GTCAGTCGGG TACTGGCCAA ACTCGGCCTA CGTGACCGGG TGCAGGCAGT CGTCTTCGCG
TACGAACACG GGGTGGTGCG GCCAGGCGGG TGA
|
|---|
| Protein sequence | MTAEPATSPA IRILLADDHH LVRTGFRVIL EVESDMHVVG EAADGERAVS MAGALRPDVV
LMDVEMPRVD GLEATRRIVA DADRSNGPAV LILTTFDRDD YLFAALRAGA SGFLLKNGTP
EALVAAIRVV ARGEGLIAPE LTRRVIAAFA RPGGEPTTTA VALSDLTPRE HEVLVLVASG
ASNAEIAANL RLGEATVKTH VSRVLAKLGL RDRVQAVVFA YEHGVVRPGG
|
|---|
| |