Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1477 |
Symbol | |
ID | 9245327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 1810307 |
End bp | 1811011 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003679414 |
Protein GI | 297560440 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.594471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGTCT CAGTACTGCT GGTCGACGAC CAGCCCCTCG TCCGCGCCGG CTTCCGCATG ATCCTGGAGT CCGCCCCGCA CCTGTCCGTC GTGGGCGAGG CCTCCGACGG CCGCGAGGCG GTCCGGGCGA CCCGCGGCCT GCTGCCCGAC GTCGTCCTCA TGGACGTGCG CATGCCCGGC ATGGACGGGA TCGAGGCCAC CCGGCAGATC GTGTCGTGGG CGCGGCCCCT GGGACACCGG GTACGGGTCC TGGCGCTGAC CACCTTCGAC CTGGACGAGT ACGCCGTCGA GGTGCTGCGC GCGGGCGCCT CCGGGTTCCT GCTCAAGGAC GCGCCGCCCG CCGAACTCGT CTCGGCCGTG GAGGTGGTCG CGGACGGGGC GGCGGCCATC TCCCCCGCGG TGCTCAACCG CCTGCTCGAC CGCTTCGCCC CGCTCCTGCC CTCCGCCTCC CCCGCCACCG AACCCGCCGA GGACACCCTG ACCGCCCGCG AGCACGAGGT CCTGCGCCTG CTCGCACGCG GGTGGTCCAA CGCCGAGATC GCCGCCCACC TGGTCCTGGG CGAGACCACC GTCAAGTCCC ACGTCGGCAG CATCCTCACC AAGCTGGAAC TGCGCGACCG GGTCCAGGCG GTGGTCTACG CCTACGAGCA CGGACTGGTC CGCCCCGGTG AGCGCGACCA CGGCTCCGGA CCCCACTCCG GCTGA
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Protein sequence | MPVSVLLVDD QPLVRAGFRM ILESAPHLSV VGEASDGREA VRATRGLLPD VVLMDVRMPG MDGIEATRQI VSWARPLGHR VRVLALTTFD LDEYAVEVLR AGASGFLLKD APPAELVSAV EVVADGAAAI SPAVLNRLLD RFAPLLPSAS PATEPAEDTL TAREHEVLRL LARGWSNAEI AAHLVLGETT VKSHVGSILT KLELRDRVQA VVYAYEHGLV RPGERDHGSG PHSG
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