More than 300 homologs were found in PanDaTox collection
for query gene Franean1_1652 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  100 
 
 		 217 aa  416  9.999999999999999e-116  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  77.78 
 
 		 225 aa  321  5e-87  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  71.37 
 
 		 234 aa  306  2.0000000000000002e-82  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  68.78 
 
 		 227 aa  289  2e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  64.19 
 
 		 225 aa  253  2.0000000000000002e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  62.21 
 
 		 225 aa  248  5e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  62.67 
 
 		 221 aa  246  2e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.5 
 
 		 225 aa  245  3e-64  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  61.33 
 
 		 229 aa  246  3e-64  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  60.66 
 
 		 221 aa  244  9e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  59.45 
 
 		 224 aa  241  7e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  59.53 
 
 		 220 aa  239  2e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  63.55 
 
 		 220 aa  238  4e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  59.45 
 
 		 239 aa  237  1e-61  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  60.65 
 
 		 241 aa  236  1e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.9 
 
 		 226 aa  236  2e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  59.72 
 
 		 218 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.92 
 
 		 227 aa  234  6e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  61.57 
 
 		 220 aa  234  7e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.99 
 
 		 226 aa  233  2.0000000000000002e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  61.47 
 
 		 225 aa  233  2.0000000000000002e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  54.58 
 
 		 250 aa  232  4.0000000000000004e-60  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.8 
 
 		 222 aa  231  5e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  60 
 
 		 225 aa  231  6e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  59.17 
 
 		 230 aa  231  8.000000000000001e-60  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  60.63 
 
 		 225 aa  230  1e-59  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  57.27 
 
 		 230 aa  230  1e-59  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  58.59 
 
 		 249 aa  228  6e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal  1 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  61.36 
 
 		 221 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  57.34 
 
 		 230 aa  226  2e-58  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  57.94 
 
 		 219 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  58.64 
 
 		 223 aa  226  3e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.73 
 
 		 222 aa  225  3e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.56 
 
 		 261 aa  225  4e-58  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  57.87 
 
 		 225 aa  225  5.0000000000000005e-58  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  60.19 
 
 		 220 aa  224  5.0000000000000005e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  60.83 
 
 		 217 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  55.96 
 
 		 218 aa  224  6e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.48 
 
 		 229 aa  224  8e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  58.8 
 
 		 224 aa  224  8e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  57.41 
 
 		 216 aa  224  9e-58  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  59.36 
 
 		 227 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  56.94 
 
 		 221 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  56.95 
 
 		 225 aa  223  2e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.22 
 
 		 218 aa  222  3e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.94 
 
 		 230 aa  222  3e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.54 
 
 		 226 aa  221  8e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.05 
 
 		 228 aa  221  8e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  58.33 
 
 		 220 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.28 
 
 		 215 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  58.8 
 
 		 220 aa  219  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  56.81 
 
 		 247 aa  219  3e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  56.94 
 
 		 221 aa  218  3.9999999999999997e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  56.16 
 
 		 239 aa  218  3.9999999999999997e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  55.25 
 
 		 234 aa  218  5e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.36 
 
 		 221 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  55.91 
 
 		 226 aa  218  7e-56  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  47.18 
 
 		 261 aa  217  1e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  53.81 
 
 		 230 aa  217  1e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  56.28 
 
 		 225 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  56.16 
 
 		 214 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  58.02 
 
 		 217 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  56.48 
 
 		 224 aa  215  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  55.14 
 
 		 219 aa  215  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  56.31 
 
 		 228 aa  215  5e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  55.09 
 
 		 211 aa  214  5.9999999999999996e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  56.64 
 
 		 239 aa  214  5.9999999999999996e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  53.7 
 
 		 226 aa  214  7e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  56.48 
 
 		 234 aa  214  7e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  54.59 
 
 		 231 aa  214  9e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  56.76 
 
 		 234 aa  213  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  54.67 
 
 		 220 aa  213  9.999999999999999e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.88 
 
 		 223 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  57.82 
 
 		 215 aa  212  2.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  55.14 
 
 		 219 aa  212  3.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.67 
 
 		 219 aa  212  3.9999999999999995e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  57.08 
 
 		 224 aa  211  5.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  56.74 
 
 		 217 aa  211  7e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  57.67 
 
 		 222 aa  211  7e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  59.26 
 
 		 222 aa  211  7.999999999999999e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.46 
 
 		 244 aa  210  1e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal  1 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  54.02 
 
 		 228 aa  210  1e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  55.46 
 
 		 235 aa  209  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.94 
 
 		 236 aa  209  2e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  51.79 
 
 		 242 aa  209  2e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  56.02 
 
 		 221 aa  208  5e-53  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  54.76 
 
 		 216 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  55.4 
 
 		 218 aa  207  7e-53  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  57.6 
 
 		 233 aa  207  9e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  54.84 
 
 		 230 aa  207  1e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  53.54 
 
 		 228 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  52.07 
 
 		 228 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52.02 
 
 		 230 aa  206  3e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.35 
 
 		 215 aa  206  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  53.52 
 
 		 215 aa  205  4e-52  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  53.49 
 
 		 225 aa  205  4e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  55.19 
 
 		 225 aa  205  4e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.75 
 
 		 224 aa  205  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.92 
 
 		 222 aa  204  7e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.16 
 
 		 221 aa  204  8e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
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