More than 300 homologs were found in PanDaTox collection
for query gene Ccur_01320 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  100 
 
 
261 aa  514  1.0000000000000001e-145  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  70.09 
 
 
228 aa  289  3e-77  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.5 
 
 
228 aa  242  3.9999999999999997e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  57.34 
 
 
222 aa  241  7e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  56.95 
 
 
226 aa  241  1e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  54.75 
 
 
224 aa  238  5.999999999999999e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  56.03 
 
 
244 aa  238  8e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  57.34 
 
 
221 aa  238  8e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.3 
 
 
224 aa  236  2e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  55 
 
 
221 aa  232  4.0000000000000004e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  55.5 
 
 
225 aa  232  4.0000000000000004e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.61 
 
 
227 aa  231  9e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  55.41 
 
 
226 aa  231  1e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  55.5 
 
 
221 aa  230  2e-59  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.33 
 
 
225 aa  230  2e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  55.3 
 
 
219 aa  228  7e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.21 
 
 
218 aa  228  8e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.82 
 
 
224 aa  227  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  54.13 
 
 
233 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.81 
 
 
222 aa  227  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  54.84 
 
 
222 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  53.39 
 
 
217 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.33 
 
 
230 aa  225  6e-58  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.91 
 
 
218 aa  225  6e-58  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.82 
 
 
229 aa  225  7e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  53.49 
 
 
221 aa  224  8e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  54.02 
 
 
226 aa  224  1e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  55.75 
 
 
227 aa  223  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  53.51 
 
 
234 aa  222  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.46 
 
 
226 aa  221  9e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  55.61 
 
 
224 aa  221  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.05 
 
 
215 aa  221  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.72 
 
 
234 aa  220  1.9999999999999999e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.88 
 
 
247 aa  219  3e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.97 
 
 
224 aa  218  5e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.42 
 
 
241 aa  218  7e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.58 
 
 
223 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  52.65 
 
 
232 aa  218  8.999999999999998e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  51.6 
 
 
224 aa  218  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.97 
 
 
225 aa  217  1e-55  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53.85 
 
 
225 aa  217  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.78 
 
 
230 aa  217  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.55 
 
 
225 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  53.88 
 
 
217 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.23 
 
 
225 aa  216  2.9999999999999998e-55  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  54.38 
 
 
220 aa  216  4e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  43.92 
 
 
261 aa  216  4e-55  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.24 
 
 
221 aa  215  5.9999999999999996e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  51.38 
 
 
223 aa  215  5.9999999999999996e-55  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.82 
 
 
218 aa  214  8e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  49.56 
 
 
224 aa  214  8e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.38 
 
 
215 aa  214  9e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.51 
 
 
222 aa  214  9.999999999999999e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  52.65 
 
 
225 aa  214  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  55.56 
 
 
217 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  54.79 
 
 
225 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  52.8 
 
 
215 aa  214  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.27 
 
 
220 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.13 
 
 
220 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  54.55 
 
 
226 aa  213  2.9999999999999995e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  52.94 
 
 
223 aa  213  2.9999999999999995e-54  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.77 
 
 
221 aa  213  2.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.64 
 
 
221 aa  212  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50 
 
 
231 aa  213  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  53 
 
 
218 aa  212  3.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  53.49 
 
 
214 aa  212  4.9999999999999996e-54  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.61 
 
 
239 aa  211  5.999999999999999e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.19 
 
 
250 aa  212  5.999999999999999e-54  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.69 
 
 
229 aa  211  9e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  53.6 
 
 
234 aa  211  1e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  52 
 
 
236 aa  211  1e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  53.27 
 
 
214 aa  211  1e-53  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  53.36 
 
 
225 aa  211  1e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50.22 
 
 
223 aa  210  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.53 
 
 
221 aa  210  2e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  51.82 
 
 
226 aa  210  2e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.43 
 
 
239 aa  210  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  51.12 
 
 
230 aa  209  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  49.78 
 
 
226 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  50.69 
 
 
226 aa  209  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.45 
 
 
228 aa  209  4e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  53.21 
 
 
217 aa  209  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.17 
 
 
222 aa  209  5e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  52.25 
 
 
302 aa  209  5e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  52.02 
 
 
230 aa  209  5e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  51.71 
 
 
235 aa  208  8e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  51.77 
 
 
228 aa  208  9e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.19 
 
 
241 aa  207  9e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.45 
 
 
226 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.29 
 
 
220 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  50.67 
 
 
230 aa  207  1e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  51.4 
 
 
235 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  52.42 
 
 
226 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  47.86 
 
 
233 aa  206  3e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  50.67 
 
 
230 aa  206  4e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50.7 
 
 
220 aa  206  4e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.67 
 
 
228 aa  205  6e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.13 
 
 
225 aa  205  7e-52  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  49.09 
 
 
221 aa  205  7e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.42 
 
 
216 aa  205  8e-52  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>