Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2037 |
Symbol | |
ID | 8883230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2160154 |
End bp | 2160831 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003510825 |
Protein GI | 291299547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.137578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA CCGTGCTCGC CGACGACCAG ACCCTGGTCC GGGCCGGTTT CAAATCCATC CTGGACGACG AGGAGGACAT CGAGGTCGTC GGCGAGGCCC CCGACGGACA ACAGGCCCTG GAACTGGCCC AGCGCCTCAA ACCCGACGTC GTCCTCATGG ACATCCGCAT GCCGGTCCTC GACGGCCTCG AAGCCACCCG CCGCATCGCC GCCGACGACC GACTGGCGGC GGTCCGCGTC ATCATCCTGA CCACATTCGA CCTCGACGAC TACGTCTACT CGGCCCTGCG AGCCGGAGCG GGCGGCTTCC TCGTCAAGGA CACCGAACCG GCCGAACTGA TCCACGCGGT CCGGGTCGTG GCCCGGGGCG ACGCCCTCAT CGCCCCCACC ATCACCCGCC GACTCCTGGC CGACTTCGCC ACCCAACACC GCGCCCCCCA ACCCAACCCG CGCCTCAACG CCCTGACCGA ACGCGAAACC GAGGTACTCG GCCTGATCGC GGCCGGTCTG TCCAACGACG AGATCGCCGC CAAACTGTTC CTCAGCCCGG CCACCTCCAA AACCCACGTC AGCCGGATCA TGTCCAAACT GGGCGCCCGC GACCGAGCCC AGCTGGTGAT CCTCGCCTAC GAGTCCGGCA TCGCCACCCC CGGCTGGCTA CGCGACGACC CGACCTGA
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Protein sequence | MIRTVLADDQ TLVRAGFKSI LDDEEDIEVV GEAPDGQQAL ELAQRLKPDV VLMDIRMPVL DGLEATRRIA ADDRLAAVRV IILTTFDLDD YVYSALRAGA GGFLVKDTEP AELIHAVRVV ARGDALIAPT ITRRLLADFA TQHRAPQPNP RLNALTERET EVLGLIAAGL SNDEIAAKLF LSPATSKTHV SRIMSKLGAR DRAQLVILAY ESGIATPGWL RDDPT
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