| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6963 |
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| Symbol | |
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| ID | 8338329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8051138 |
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| End bp | 8051815 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644960043 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003117634 |
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| Protein GI | 256396070 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.029709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTGC GAGTACTCCT CGTCGACGAC CAACCCCTGA TGCTCGTCGG ACTCGGCATC
CTGATCGGCG ACACCGACGA CCTCGAGGTG GTAGCCCAGG CCGCCAACGG CCGCGAGGCA
GTACGCCTGG TCCGCGAACT ACACCCGGAC GTCGTAGTGA TGGACATCCG AATGCCAGGC
ATGGACGGCA TCGAGGCCAC CCGCCAGGCA ACCGCCGAGC CCGACCCACC CAAGATCCTG
GTCCTGACAA CCTTCGACGA CGACGAATAC GTCTACGGCG CCCTCCGCGC CGGAGCCAGC
GGCTTCCTCC TCAAGAGCAT GGCCCTGGAC GCAATCCTCG ACGCAATCCG CGTAGTCGCA
GCCGGCGACG CACTGATCGC CCCCAGCGTG ACCCGCCGCC TGATCGCGGA CTTCACCGCA
ACCCCCACCA CCCCCAAACC ACACCCCGAA CCCCTCGAGC ACCCGCACCA GATCGCGCAA
ATCACCGACC GAGAGCGCGA AGTCCTGGCA CTGGTCGGCC AGGGACTATC GAACGCCGAG
ATAGCCGAAC GCCTAATCAT CAGCGCAGCA ACCGCGAAGA CCCACGTAGC GCGCCTGTTC
GCCAAGCTCG AAGCCCGGGA CCGCGTCCAC CTGGCCATCA TCGCCTTCGA ATCCGGACTC
GTGCCGCGTA GACGCTAG
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| Protein sequence | MTVRVLLVDD QPLMLVGLGI LIGDTDDLEV VAQAANGREA VRLVRELHPD VVVMDIRMPG
MDGIEATRQA TAEPDPPKIL VLTTFDDDEY VYGALRAGAS GFLLKSMALD AILDAIRVVA
AGDALIAPSV TRRLIADFTA TPTTPKPHPE PLEHPHQIAQ ITDREREVLA LVGQGLSNAE
IAERLIISAA TAKTHVARLF AKLEARDRVH LAIIAFESGL VPRRR
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