More than 300 homologs were found in PanDaTox collection
for query gene Krad_4217 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  100 
 
 
225 aa  426  1e-118  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  72.2 
 
 
219 aa  300  1e-80  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  71.75 
 
 
220 aa  299  3e-80  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  72.65 
 
 
219 aa  297  8e-80  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  70.64 
 
 
228 aa  297  9e-80  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  70.67 
 
 
234 aa  295  5e-79  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  68.58 
 
 
219 aa  293  2e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  70.23 
 
 
211 aa  288  7e-77  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  69.51 
 
 
219 aa  280  9e-75  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  63.8 
 
 
226 aa  254  9e-67  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  62.9 
 
 
221 aa  247  1e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  63.96 
 
 
220 aa  245  4e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  60.44 
 
 
225 aa  242  3e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  61.09 
 
 
218 aa  242  3e-63  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  62.73 
 
 
221 aa  242  3e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  60.54 
 
 
227 aa  241  6e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  57.92 
 
 
225 aa  241  7e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  59.55 
 
 
224 aa  240  2e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  59.38 
 
 
225 aa  239  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  59.11 
 
 
218 aa  238  8e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  67.36 
 
 
217 aa  236  2e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  59.03 
 
 
226 aa  236  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.44 
 
 
229 aa  235  3e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  60.45 
 
 
226 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  59.73 
 
 
227 aa  231  6e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  59.64 
 
 
220 aa  229  2e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  56.11 
 
 
222 aa  230  2e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  58.3 
 
 
239 aa  230  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  59.64 
 
 
226 aa  229  4e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.41 
 
 
239 aa  228  5e-59  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  57.21 
 
 
221 aa  228  5e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  56.03 
 
 
234 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  58.93 
 
 
227 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.56 
 
 
218 aa  227  9e-59  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  55.25 
 
 
225 aa  227  1e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.7 
 
 
221 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  58.82 
 
 
215 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  225  4e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.05 
 
 
228 aa  225  4e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  57.73 
 
 
217 aa  225  5.0000000000000005e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.14 
 
 
222 aa  224  7e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.83 
 
 
225 aa  224  9e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  58.37 
 
 
216 aa  223  1e-57  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  57.01 
 
 
225 aa  224  1e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  57.27 
 
 
217 aa  223  2e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  55.71 
 
 
215 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  55.41 
 
 
222 aa  221  6e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  55.41 
 
 
218 aa  221  6e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.04 
 
 
224 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  52.17 
 
 
230 aa  221  9.999999999999999e-57  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  58.72 
 
 
247 aa  219  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  52.27 
 
 
215 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  53.33 
 
 
226 aa  219  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  54.67 
 
 
228 aa  219  1.9999999999999999e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  54.09 
 
 
221 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  56.05 
 
 
221 aa  220  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  58.64 
 
 
225 aa  220  1.9999999999999999e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.04 
 
 
225 aa  219  3e-56  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  57.59 
 
 
225 aa  219  3.9999999999999997e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  55.71 
 
 
249 aa  218  6e-56  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  52.27 
 
 
218 aa  218  7e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  55.11 
 
 
226 aa  217  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  52.75 
 
 
215 aa  217  1e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  58.04 
 
 
226 aa  217  1e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  56.5 
 
 
223 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.23 
 
 
261 aa  216  2e-55  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  57.96 
 
 
232 aa  216  2e-55  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.75 
 
 
226 aa  216  2.9999999999999998e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  52.89 
 
 
223 aa  216  2.9999999999999998e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  56.31 
 
 
218 aa  215  4e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  55.56 
 
 
230 aa  215  4e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  60.63 
 
 
217 aa  215  4e-55  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.04 
 
 
228 aa  215  4e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.41 
 
 
220 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  51.11 
 
 
224 aa  214  8e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  55.76 
 
 
232 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.61 
 
 
230 aa  213  9.999999999999999e-55  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  52.97 
 
 
215 aa  213  1.9999999999999998e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  53.64 
 
 
216 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  55.4 
 
 
213 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.42 
 
 
236 aa  213  1.9999999999999998e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  57.27 
 
 
214 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  57.85 
 
 
220 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.34 
 
 
217 aa  213  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  56.56 
 
 
224 aa  213  2.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  58.3 
 
 
234 aa  212  3.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.58 
 
 
221 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.65 
 
 
230 aa  212  3.9999999999999995e-54  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.12 
 
 
220 aa  211  4.9999999999999996e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  53.39 
 
 
230 aa  211  5.999999999999999e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  54.75 
 
 
223 aa  211  7e-54  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.95 
 
 
231 aa  211  7.999999999999999e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.05 
 
 
218 aa  210  1e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  54.42 
 
 
234 aa  211  1e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  51.04 
 
 
250 aa  209  2e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  52.38 
 
 
242 aa  210  2e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.35 
 
 
215 aa  210  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  55.96 
 
 
213 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  44.09 
 
 
261 aa  209  3e-53  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  54.3 
 
 
213 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
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