Gene Noca_1020 details

Gene Information

• Locus tag: Noca_1020
• ID: 4599681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1071786
• End bp: 1072442
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639775619
• Product: response regulator receiver
• Protein accession: YP_922226
• Protein GI: 119715261
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.648692
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCC GGGTGCTGGT CGTCGACGAC CAGTCGATGG TGCGGGCCGG GCTGCGGATG 
CTGCTGGCCG ACGAGCCGGA CATCGAGGTG GTCGCGGAGG CCGGCAACGG CCGGGAGGCG 
GTCGCCCAGG CTGCGCGCTT CCACCCGGAC GTCGTGCTGA TGGACATCCG GATGCCCGAG 
CTCGACGGCC TCGAGGCGAC CCGCCGGATC CTGGCGGCCG GCGACACCGC GCGCGTGCTC 
GTCCTCACGA CGTTCAACCT CGACGAGTAC GTCTACGAGG CGCTGGGCGC CGGCGCCAGC 
GGGTTCGTGC TCAAGGACGA CCCGCCCGAA CAGCTGATCG CCGCCGTCCG GACCATCGCC 
GACGGCGACG CGCTGCTCTC GCCCACCGTC ACCCGCCGGG TGATCCGCGA GTTCACCCGG 
CTGCGCCGGC AGCCGCCGCC CGCGGCGGTG GCGACGCTGA CCGGCCGCGA GCTGGAGGTG 
TTCCGGCTGA TCACCCAGGG CCTGTCCAAC GCCGAGATCG GGCGGGAGCT GTTCATCAGC 
GACACCACCG TGAAGACCCA CGTGACCCGG CTGTTCCAGA AGCTCGATCT GCGCGACCGG 
GCCCAGGCGA TCGTGCTCGC CTACCAGACC GGCATCTTCG CGCCCACGGA CCGCTGA 

 

Protein sequence

MTIRVLVVDD QSMVRAGLRM LLADEPDIEV VAEAGNGREA VAQAARFHPD VVLMDIRMPE 
LDGLEATRRI LAAGDTARVL VLTTFNLDEY VYEALGAGAS GFVLKDDPPE QLIAAVRTIA 
DGDALLSPTV TRRVIREFTR LRRQPPPAAV ATLTGRELEV FRLITQGLSN AEIGRELFIS 
DTTVKTHVTR LFQKLDLRDR AQAIVLAYQT GIFAPTDR