More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0102 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  100 
 
 
221 aa  426  1e-118  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  68.95 
 
 
215 aa  293  1e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  66.21 
 
 
225 aa  291  4e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  65.16 
 
 
222 aa  285  2.9999999999999996e-76  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  65.3 
 
 
224 aa  284  8e-76  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  66.67 
 
 
221 aa  283  2.0000000000000002e-75  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  64.38 
 
 
221 aa  282  3.0000000000000004e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  66.36 
 
 
219 aa  281  8.000000000000001e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  67.57 
 
 
224 aa  271  4.0000000000000004e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  64.57 
 
 
222 aa  268  5.9999999999999995e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  63.13 
 
 
221 aa  267  1e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  63.23 
 
 
226 aa  265  5e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  64.35 
 
 
223 aa  260  1e-68  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  64.22 
 
 
226 aa  257  8e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  61.71 
 
 
220 aa  256  2e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  63.64 
 
 
222 aa  255  4e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  57.34 
 
 
233 aa  255  5e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  59.31 
 
 
244 aa  251  4.0000000000000004e-66  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  61.09 
 
 
230 aa  251  5.000000000000001e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  60.47 
 
 
217 aa  249  3e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  58.45 
 
 
218 aa  247  8e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  60.89 
 
 
232 aa  246  2e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  59.72 
 
 
226 aa  246  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  59.91 
 
 
218 aa  243  9.999999999999999e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  58.74 
 
 
247 aa  241  3.9999999999999997e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  57.21 
 
 
228 aa  241  5e-63  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  62.33 
 
 
214 aa  241  9e-63  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  60.75 
 
 
215 aa  240  1e-62  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  58.64 
 
 
223 aa  240  1e-62  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.33 
 
 
226 aa  239  2e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  55.98 
 
 
231 aa  239  2.9999999999999997e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  57.34 
 
 
261 aa  238  4e-62  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  58.14 
 
 
228 aa  238  4e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  61.01 
 
 
225 aa  238  5.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  62.21 
 
 
217 aa  238  6.999999999999999e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  58.53 
 
 
218 aa  235  3e-61  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.96 
 
 
226 aa  234  5.0000000000000005e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.33 
 
 
229 aa  234  9e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  57.34 
 
 
225 aa  233  1.0000000000000001e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.09 
 
 
222 aa  233  1.0000000000000001e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  57.6 
 
 
220 aa  233  1.0000000000000001e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.85 
 
 
227 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  55.91 
 
 
221 aa  231  5e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.55 
 
 
225 aa  231  5e-60  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  57.48 
 
 
224 aa  231  9e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  57.66 
 
 
224 aa  230  1e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  57.53 
 
 
226 aa  230  2e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  57.66 
 
 
230 aa  228  5e-59  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  55.66 
 
 
231 aa  228  6e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  57.14 
 
 
236 aa  227  9e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  58.06 
 
 
220 aa  227  9e-59  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  60.37 
 
 
220 aa  227  9e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.56 
 
 
224 aa  227  9e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  54.34 
 
 
224 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  57.99 
 
 
224 aa  226  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  57.73 
 
 
215 aa  225  3e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.5 
 
 
227 aa  225  3e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  55.51 
 
 
221 aa  225  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  56.07 
 
 
219 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  57.71 
 
 
227 aa  224  6e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  44.27 
 
 
261 aa  224  7e-58  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55.07 
 
 
241 aa  224  7e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  59.36 
 
 
241 aa  224  8e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  57.8 
 
 
225 aa  224  9e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  58.99 
 
 
302 aa  224  9e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  56.05 
 
 
230 aa  224  1e-57  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  57.14 
 
 
225 aa  223  1e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.14 
 
 
222 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  56.07 
 
 
234 aa  224  1e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.33 
 
 
236 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  56.31 
 
 
223 aa  223  3e-57  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  55.61 
 
 
220 aa  221  4.9999999999999996e-57  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  55.71 
 
 
225 aa  221  4.9999999999999996e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  60.27 
 
 
221 aa  221  8e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  58.26 
 
 
216 aa  221  9e-57  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  54.17 
 
 
230 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  56.62 
 
 
226 aa  220  9.999999999999999e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  55 
 
 
221 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  58.49 
 
 
232 aa  221  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  54.55 
 
 
234 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.88 
 
 
218 aa  219  1.9999999999999999e-56  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  54.55 
 
 
249 aa  219  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  56.05 
 
 
225 aa  220  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  56.07 
 
 
219 aa  219  1.9999999999999999e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  54.67 
 
 
228 aa  219  3e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  56.84 
 
 
235 aa  218  3.9999999999999997e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  48.35 
 
 
248 aa  218  5e-56  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  54.75 
 
 
230 aa  218  5e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  55.96 
 
 
217 aa  218  7.999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  55 
 
 
220 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  56.07 
 
 
219 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  57.01 
 
 
214 aa  216  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  53.15 
 
 
223 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  53.92 
 
 
226 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  54.95 
 
 
225 aa  217  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  51.85 
 
 
250 aa  216  2e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.6 
 
 
229 aa  216  2e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.6 
 
 
239 aa  216  2e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  54.46 
 
 
219 aa  216  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  56.07 
 
 
214 aa  216  2e-55  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
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