Gene Snas_5265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5265 
Symbol 
ID8886474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5592236 
End bp5592892 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003513992 
Protein GI291302714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGG TGGCGCTGGC CGAGGACCAG GAACTGGTGC GCACCGGCTT CAAGCTGCTG 
CTGGACTCCG AGGACGACAT CGTCGTCGTG GGCGAGGCGG CCAACGGCGG CGCGGCGGTC
GCGCTGGCCC GCGAGGAGAA ACCCGACGTC CTGCTGATGG ACATCCAGAT GCCATTGGTC
GACGGCCTCA CCGCGACGAA ACTCATCGTC GGGGACCCGG ACCTCGACGG GGTGCGGGTC
GTCATGCTGA CCACGTTCGC GGCCGACGCG AAACTGTTCG CCGCCCTGCG CGCGGGGGCG
AGCGGGTACC TCGTCAAGGA CGCGGAACCG CACGAACTGC TGCACGGCGT CCGCGTGGTG
GCGCGGGGCG ACGGGCTGCT GTCGGCGTCG GTGACCAGGC GGGTGATCGA GTCGTTCGCC
GACACCACGG CCACCGACGC CCCCGACATC GACGGCCTCA CCGACCGCGA GACCGAGGTT
CTGGGGCTGG TGGCGCGCGG CCTGTCGAAC GCCGAGATTG CGGGACGGCT GAGCATGTCC
CCGGCGACGG CGAAGACGCA CGTCAACCGC ACGATGACGA AGCTCGGGGC CCGGGACCGG
GCGCAGCTGG TGATCTTCGC GTACGAGACC GGCCTGGTGG TGCCGACCCC GCGCTGA
 
Protein sequence
MIRVALAEDQ ELVRTGFKLL LDSEDDIVVV GEAANGGAAV ALAREEKPDV LLMDIQMPLV 
DGLTATKLIV GDPDLDGVRV VMLTTFAADA KLFAALRAGA SGYLVKDAEP HELLHGVRVV
ARGDGLLSAS VTRRVIESFA DTTATDAPDI DGLTDRETEV LGLVARGLSN AEIAGRLSMS
PATAKTHVNR TMTKLGARDR AQLVIFAYET GLVVPTPR