| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3727 |
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| Symbol | |
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| ID | 5672092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4411766 |
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| End bp | 4412446 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641242608 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001508028 |
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| Protein GI | 158315520 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.554715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC GAGTGCTCCT CGCCGACGAC CAGACCCTCC TACGAGCGAC CTTCCGGATT
CTGATCGACT CGTGCGAGGA CATGGAAGTC GTCGCTGAAG CCGCAGACGG CCACGAAGCC
ATCGCAGCGG CCCGTGAACA CCACCCGGAC GTCGTGCTCA TGGACATCCG CATGCCCGGC
ACCGACGGAC TCGCCGCCAC CGCCGCCATC TGCAGCGACG AAACACTCGC CGCCACGCAC
GTCCTCATCC TCACCACCTT CGAAATCGAC GAATACGTCA CCCAGGCACT TCACGTCGGA
GCAAGCGGCT TCCTCGGTAA AGACGTCGGA ACGGACGAGC TCCTCACCGC CATCCGCACC
ATCGCCGGCG GCGACGCGCT TCTCTCCCCG GCAGCCACCC GCGCCCTCAT CGCCCGGTTC
CTCGCCACCC CCGAACCCAC AGCCACCGCC AGGACAAACC CCGCAGTCCT CACGACGCTC
ACCGCCCGCG AACGAGAAGT CATGGTGCTG GTAGCCGAGG GCTACTCGAA CCACGACATC
GCCCGTCGCC TTGTCATCAG CCCACTGACC GCCCGCACGC ACGTCCACCG AGCCATGACA
AAACTCGAAG CCCGCGACCG GGCGCAGCTC GTCGTCATCG CCTACCAGTC CGGCCTGCTA
CAAACCACCC CATCGGACTG A
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| Protein sequence | MTIRVLLADD QTLLRATFRI LIDSCEDMEV VAEAADGHEA IAAAREHHPD VVLMDIRMPG
TDGLAATAAI CSDETLAATH VLILTTFEID EYVTQALHVG ASGFLGKDVG TDELLTAIRT
IAGGDALLSP AATRALIARF LATPEPTATA RTNPAVLTTL TAREREVMVL VAEGYSNHDI
ARRLVISPLT ARTHVHRAMT KLEARDRAQL VVIAYQSGLL QTTPSD
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