Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4872 |
Symbol | |
ID | 9248759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 3615 |
End bp | 4313 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003682761 |
Protein GI | 297563788 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.247388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGGGT CCCAGGAGGC CGGAGGGGAG CGGGCGGTGC CCGGCGGCGG CGAGGCGCCG ATCCGGGTGC TGCTGGCGGA CGACCAGGCC ATGGTGCGGA CCGGGTTCCG GTACATGCTG GCGGCCGAGG ACGGCGTCGA GGTGGTGGGC GAGGCCGGTG ACGGTCTGGA GGCGGTCCGG CTGGCGCGGG AGCTGCGCCC GGACGTGGTG CTCATGGACA TCCGGATGCC GGGGGTGGAC GGCCTGGAGG CCACCCGGCG GCTGGCAGGT CCGGGGGTGG CCGACCCGCT CCGGGTGGTC GTGGTGACCA CGTTCGACCT GGACGAGTAC GTGCACGCGG CGATCACCGG AGGGGCGGTC GGATTCCTGC TCAAGGACGC CGGACCGGCC CTGCTGGTGG AGGCGGTGCG GGCCGCCGCC AGGGGCGACG CCCTGGTATC CCCGAGGGTC ACCGTGCGGC TGCTGCGGCA CTTCGCGGCG GCGCCCCGGT CCGCGCCGGG GGACGGCGGG CTGACCGTGC GGGAGCTGGA CATCGTGCGC GCGGTGGCGC GGGGGCTGAC CAACACCGAG GTGGCCGGGG AGCTGTTCGT CACCGTGAGC ACGGTCAAGA CGCACCTGGC GAGCGTGCAG GCCAAGCTGG GGGCGCGCAA CCGCGTGGAG GTGGCGGCCT GGGCCTACCG CAACGGGCAC GCGGAGTAG
|
Protein sequence | MRGSQEAGGE RAVPGGGEAP IRVLLADDQA MVRTGFRYML AAEDGVEVVG EAGDGLEAVR LARELRPDVV LMDIRMPGVD GLEATRRLAG PGVADPLRVV VVTTFDLDEY VHAAITGGAV GFLLKDAGPA LLVEAVRAAA RGDALVSPRV TVRLLRHFAA APRSAPGDGG LTVRELDIVR AVARGLTNTE VAGELFVTVS TVKTHLASVQ AKLGARNRVE VAAWAYRNGH AE
|
| |