Gene Amir_6405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6405 
Symbol 
ID8330616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7499068 
End bp7499745 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID644946833 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003104052 
Protein GI256380392 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCA GGGTCCTGCT CGCCGACGAC CAACCCCTGA TCCGCGCCGG TTACCGCATG 
ATCCTGGACT CCGAACCGGA CCTGGAGGTC GTCGGCGAGG CGGTCAACGG CCGGGAAGCG
GTGTTCCTGG CCCGCACCAC CCGCGCCGAC GTGGTCCTGA TGGACATCCG GATGCCCGAG
GTGGACGGCA TCGAGGCGAC CCGCCGCATC GCCGCCGACG AGGACCTCGC CGGGGTGCGC
ATCCTGGTCC TGACCACGTT CGAGGAGGAC GAGAACGTGC TCCGGGCCGT GCGCGCGGGC
GCGGCGGGCT TCCTCGGCAA GAACGTCGGC CCCGCCGAAC TGCTGCACGC GGTCCGAACC
GTGGCGTCAG GCGACTCGAT CCTGTCGCCC GCCGCCACCA AGGCCCTGGT GCGGCACGTC
CTGGCCCACC CGGAATCCGA CCCGCCCCAG GCCCCGGCCC CGCTGGAACT GCTGACCGAC
CGCGAGCGCG AGGTCGTGGT CCTGGCCGCC CACGGCCTGT CGAACGACCG CATAGCCGAA
CACCTGCACC TGTCCCCGCT GACCGCCAAG ACCCACGTGA ACCGCGCGAT GTCCAAGCTG
AACACCCGCG ACCGCGCACA ACTGGTCGTC CTGGCCTACC GCACCGGCCT GGTCCGCCCG
GACGACGCGC GGCCCTGA
 
Protein sequence
MTTRVLLADD QPLIRAGYRM ILDSEPDLEV VGEAVNGREA VFLARTTRAD VVLMDIRMPE 
VDGIEATRRI AADEDLAGVR ILVLTTFEED ENVLRAVRAG AAGFLGKNVG PAELLHAVRT
VASGDSILSP AATKALVRHV LAHPESDPPQ APAPLELLTD REREVVVLAA HGLSNDRIAE
HLHLSPLTAK THVNRAMSKL NTRDRAQLVV LAYRTGLVRP DDARP