Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6405 |
Symbol | |
ID | 8330616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7499068 |
End bp | 7499745 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946833 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003104052 |
Protein GI | 256380392 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACCA GGGTCCTGCT CGCCGACGAC CAACCCCTGA TCCGCGCCGG TTACCGCATG ATCCTGGACT CCGAACCGGA CCTGGAGGTC GTCGGCGAGG CGGTCAACGG CCGGGAAGCG GTGTTCCTGG CCCGCACCAC CCGCGCCGAC GTGGTCCTGA TGGACATCCG GATGCCCGAG GTGGACGGCA TCGAGGCGAC CCGCCGCATC GCCGCCGACG AGGACCTCGC CGGGGTGCGC ATCCTGGTCC TGACCACGTT CGAGGAGGAC GAGAACGTGC TCCGGGCCGT GCGCGCGGGC GCGGCGGGCT TCCTCGGCAA GAACGTCGGC CCCGCCGAAC TGCTGCACGC GGTCCGAACC GTGGCGTCAG GCGACTCGAT CCTGTCGCCC GCCGCCACCA AGGCCCTGGT GCGGCACGTC CTGGCCCACC CGGAATCCGA CCCGCCCCAG GCCCCGGCCC CGCTGGAACT GCTGACCGAC CGCGAGCGCG AGGTCGTGGT CCTGGCCGCC CACGGCCTGT CGAACGACCG CATAGCCGAA CACCTGCACC TGTCCCCGCT GACCGCCAAG ACCCACGTGA ACCGCGCGAT GTCCAAGCTG AACACCCGCG ACCGCGCACA ACTGGTCGTC CTGGCCTACC GCACCGGCCT GGTCCGCCCG GACGACGCGC GGCCCTGA
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Protein sequence | MTTRVLLADD QPLIRAGYRM ILDSEPDLEV VGEAVNGREA VFLARTTRAD VVLMDIRMPE VDGIEATRRI AADEDLAGVR ILVLTTFEED ENVLRAVRAG AAGFLGKNVG PAELLHAVRT VASGDSILSP AATKALVRHV LAHPESDPPQ APAPLELLTD REREVVVLAA HGLSNDRIAE HLHLSPLTAK THVNRAMSKL NTRDRAQLVV LAYRTGLVRP DDARP
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