| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7843 |
|---|
| Symbol | |
|---|
| ID | 8339219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9101658 |
|---|
| End bp | 9102353 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960927 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003118508 |
|---|
| Protein GI | 256396944 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.176081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA TCCTGATCGC CGACGACCAA GCACTGCTGC GCGCCTCGCT GCGGTCGCTG
GTCAACGGCT ACGACGACTG CCAGGTCGTC GGCGAGGCGG CGAACGGCGC GCAGGCCGTG
CACATGGCCG CCGGCCTGCG CCCCGACCTG GTGCTGATGG ACGTCCGGAT GCCGGTGCTG
GACGGCATCG AGGCCACCCG CCGGATCACC GCCGCCGACC CCGGCGTCCG GGTCCTGATC
CTGACCACCT TCGACCTCGA CGAATACGTC TACGAGGGCT TGCTCGCCGG CGCCAGCGGC
TTCCTGCTCA AGGACTCGCC ACCCGCCGAC CTGGTCACGG CGATCGAGGT GATCCGCAGC
GGCGAAGCGC TACTGACCCC GGCCGCGACC CGCAGGCTGA TCACGGAGTT CGTCCGGAGC
CGCAGGACGC CGAACCGCGC GACAGCGACC GCAGCCACGA CAGCGAACGC CATCGCGCCG
CCCGACCCCG CCCTCGACGG CCTGACCGCC CGCGAACGCG AGGTCCTGAC CCTCGTCGCC
CGCGGTAAGT CGAACACCGA GATCAGCACC GAACTCTTCG TTTCGATGTC GACGGTCAAG
ACGCACATGT CGGCGCTACT GGCGAAACTC GGCGCGCGAG ATCGGGCCCA ACTGGTCATC
CGCGCCTATG AAGGTGGCCT GGTGCGAGCA GGATGA
|
|---|
| Protein sequence | MSRILIADDQ ALLRASLRSL VNGYDDCQVV GEAANGAQAV HMAAGLRPDL VLMDVRMPVL
DGIEATRRIT AADPGVRVLI LTTFDLDEYV YEGLLAGASG FLLKDSPPAD LVTAIEVIRS
GEALLTPAAT RRLITEFVRS RRTPNRATAT AATTANAIAP PDPALDGLTA REREVLTLVA
RGKSNTEIST ELFVSMSTVK THMSALLAKL GARDRAQLVI RAYEGGLVRA G
|
|---|
| |