More than 300 homologs were found in PanDaTox collection
for query gene Krad_1350 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  100 
 
 
249 aa  483  1e-135  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  64.81 
 
 
234 aa  271  6e-72  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  67.09 
 
 
239 aa  269  2.9999999999999997e-71  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  63.6 
 
 
242 aa  268  5.9999999999999995e-71  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  61.97 
 
 
231 aa  268  7e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  64.5 
 
 
230 aa  263  3e-69  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.6 
 
 
229 aa  261  8e-69  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.3 
 
 
236 aa  259  2e-68  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  60 
 
 
221 aa  248  6e-65  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  59.91 
 
 
227 aa  247  1e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  62.07 
 
 
225 aa  247  1e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  57.55 
 
 
239 aa  244  9e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.09 
 
 
244 aa  242  5e-63  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  56.18 
 
 
250 aa  241  1e-62  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.62 
 
 
226 aa  240  2e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  58.01 
 
 
218 aa  239  2.9999999999999997e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.21 
 
 
226 aa  238  9e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  58.52 
 
 
225 aa  237  1e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_4009  two component transcriptional regulator, LuxR family  57.56 
 
 
231 aa  237  1e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0669057  normal  0.324745 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  56.25 
 
 
233 aa  235  4e-61  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  57.94 
 
 
229 aa  236  4e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  61.14 
 
 
223 aa  233  2.0000000000000002e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  56.41 
 
 
230 aa  231  8.000000000000001e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  58.52 
 
 
222 aa  231  8.000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  52.89 
 
 
248 aa  231  1e-59  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  56.47 
 
 
225 aa  231  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  60.18 
 
 
216 aa  230  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  54.85 
 
 
234 aa  228  5e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.89 
 
 
226 aa  228  7e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.78 
 
 
217 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  56.22 
 
 
234 aa  226  2e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  57.2 
 
 
225 aa  224  9e-58  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  46.74 
 
 
261 aa  223  3e-57  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.02 
 
 
221 aa  223  3e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.7 
 
 
220 aa  221  8e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.78 
 
 
234 aa  219  3e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  55.41 
 
 
225 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.95 
 
 
219 aa  219  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  55.22 
 
 
230 aa  218  6e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  59.13 
 
 
217 aa  218  6e-56  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.47 
 
 
227 aa  218  7e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  52.17 
 
 
218 aa  218  1e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  55.26 
 
 
223 aa  216  2e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  53.51 
 
 
228 aa  217  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  53.91 
 
 
216 aa  214  8e-55  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.85 
 
 
226 aa  214  8e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  57.02 
 
 
220 aa  214  9.999999999999999e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  52.42 
 
 
213 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.55 
 
 
220 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.51 
 
 
220 aa  213  1.9999999999999998e-54  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  55.46 
 
 
227 aa  213  1.9999999999999998e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  57.52 
 
 
221 aa  213  2.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.95 
 
 
219 aa  213  2.9999999999999995e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.54 
 
 
221 aa  212  3.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.39 
 
 
230 aa  212  3.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.71 
 
 
218 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.46 
 
 
225 aa  211  7e-54  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  52.84 
 
 
222 aa  211  7.999999999999999e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  56.19 
 
 
225 aa  210  1e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.14 
 
 
225 aa  210  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  51.97 
 
 
226 aa  209  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  51.97 
 
 
221 aa  209  3e-53  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  55.7 
 
 
219 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.52 
 
 
239 aa  209  3e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.79 
 
 
224 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.87 
 
 
224 aa  208  6e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50.22 
 
 
215 aa  208  8e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.32 
 
 
221 aa  208  8e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53.59 
 
 
230 aa  207  9e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.42 
 
 
219 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52.84 
 
 
221 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  50 
 
 
230 aa  207  1e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.42 
 
 
226 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  50.62 
 
 
230 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  48.58 
 
 
241 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  51.09 
 
 
220 aa  205  6e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.85 
 
 
258 aa  205  6e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  50.86 
 
 
225 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  51.29 
 
 
228 aa  203  2e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  54.47 
 
 
224 aa  203  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  51.32 
 
 
220 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  49.78 
 
 
224 aa  201  7e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.12 
 
 
222 aa  201  7e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  51.1 
 
 
214 aa  201  8e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  53.07 
 
 
222 aa  201  9.999999999999999e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.48 
 
 
220 aa  201  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  49.57 
 
 
226 aa  199  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.59 
 
 
215 aa  200  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50.21 
 
 
228 aa  199  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  58.67 
 
 
218 aa  199  3e-50  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  51.07 
 
 
215 aa  199  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  54.11 
 
 
241 aa  199  3.9999999999999996e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  50.21 
 
 
232 aa  198  7e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.66 
 
 
261 aa  197  9e-50  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  51.97 
 
 
217 aa  198  9e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  51.52 
 
 
247 aa  197  1.0000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.91 
 
 
258 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.75 
 
 
215 aa  197  1.0000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  52.3 
 
 
235 aa  197  1.0000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  49.79 
 
 
244 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
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