| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4937 |
|---|
| Symbol | |
|---|
| ID | 8735403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 5265180 |
|---|
| End bp | 5265854 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646505564 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003396723 |
|---|
| Protein GI | 284046383 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.570807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.210467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGG TAGTGGTGGC AGACGACATG GCGCTGGTGC GCGGCGGCAT GAAGATGATC
CTCGAGGCCG ATCCCGGCGT ACGCGTGGTC GGGGAGGCGG CCGACGGCGC CGACGCCGTC
GAGCAGGCGA TCAGAACCGG GCCGGACGTG GCGGTGATGG ACATCCGCAT GCCGCACGTC
GACGGGATCG AGGCGACACG CCGGCTGCAG CAGCGGATGC CGGACGTGCG CGTGCTGGTC
GTGACGACGT TCCACCTCGA CGAGTACGTC CACGAGGCGC TGCGCGCCGG CGCGTCCGGC
TTCCTGCTGA AGGACACCGC GCCCGACTCG CTCGTCGACG CGGTCCGCAC GGTCGCGGCC
GGCGACGCGC TGCTCTCCCC CGCCGTCACC CGCCAGCTGA TCGAGCACTA CGTCCAGCGG
CCGACGCCCG ACGCCGGGCT GACCGGCCGC CTCGCAGAGC TGACGCCGCG CGAGCTCGAC
GTCGCGCGGC TGGTCGCGCG CGGCATGACG AACGCCGAGA TCGCCGCCGA GCTGTTCCTC
GGCGAGGGGA CCGTCAAGAC GCACGTGACG AGCATCCTGT CGAAGCTCGC GCTGCGCAAC
CGCACGCAGA TCGTCGTCGC CGCGTACGAG AGCGGCCTCG TCGAGCTGGG CCGCAACGAG
CTGCCGAGCG TGTAG
|
|---|
| Protein sequence | MIRVVVADDM ALVRGGMKMI LEADPGVRVV GEAADGADAV EQAIRTGPDV AVMDIRMPHV
DGIEATRRLQ QRMPDVRVLV VTTFHLDEYV HEALRAGASG FLLKDTAPDS LVDAVRTVAA
GDALLSPAVT RQLIEHYVQR PTPDAGLTGR LAELTPRELD VARLVARGMT NAEIAAELFL
GEGTVKTHVT SILSKLALRN RTQIVVAAYE SGLVELGRNE LPSV
|
|---|
| |