Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3601 |
Symbol | |
ID | 9247470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4314936 |
End bp | 4315604 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003681507 |
Protein GI | 297562533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.324048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCCGGG TACTGCTCGC CGACGACCAG GCGCTGGTAC GCGCGGGGTT CCGCGCTCTG CTGGACAGCG CCCCCGACAT CGAGGTGGTC GCCGAGGCCG CCGACGGCGA AGCGGCCGTC CGGCTGGCCC GCGCCGAACG CCCGGACGTG GTCCTCATGG ACATCCGCAT GCCCGGTGTG GACGGCCTGG CCGCCGCCGG GCGCATCCTG GCCGATCCCG CCCTGGAGGC GACGCGGGTC GTCATCCTCA CCACGTTCGA CCTGGACGAG TACATCTTCG AGGCGCTGCG CGCGGGCGCC AGCGGGTTCC TGGTCAAGGA CACCGAGCCC GGGGACCTGC TGCGGGCGGT GCGGGTGGTG CACGGCGGCG AGGCGCTGCT GTCGCCGGGC ATCACCCGGC GGCTGATCGC CGACTACGCG CGCCGGCCGC CGAGCGCGCC CGACCCGTCG GTCCGGCTGA ACGGGCTCAC CGAGCGCGAA CGCGAGGTGG TCGCCCTGGT CGGCGGCGGA CTGTCCAACG AGGAGATCGC CGCCCACCTC GTGCTCAGCC CGGCCACCGC CAAGACCCAC GTGAGCCGGG CCATGGTCAA GCTGGGGGTG CGCGACCGCG CCCAGCTGGT CGTCATCGCC TACGAGACCG CCCTGGTCAC CCCGAAGTGG AGCCGGTGA
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Protein sequence | MIRVLLADDQ ALVRAGFRAL LDSAPDIEVV AEAADGEAAV RLARAERPDV VLMDIRMPGV DGLAAAGRIL ADPALEATRV VILTTFDLDE YIFEALRAGA SGFLVKDTEP GDLLRAVRVV HGGEALLSPG ITRRLIADYA RRPPSAPDPS VRLNGLTERE REVVALVGGG LSNEEIAAHL VLSPATAKTH VSRAMVKLGV RDRAQLVVIA YETALVTPKW SR
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