More than 300 homologs were found in PanDaTox collection
for query gene Amir_2232 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  100 
 
 
302 aa  575  1.0000000000000001e-163  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  68.49 
 
 
228 aa  282  6.000000000000001e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  70.91 
 
 
226 aa  277  2e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  69.44 
 
 
247 aa  267  2e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  64.04 
 
 
231 aa  254  9e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.78 
 
 
229 aa  244  9.999999999999999e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  61.82 
 
 
225 aa  242  5e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  58.53 
 
 
225 aa  240  2e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  57.99 
 
 
221 aa  238  8e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  60.75 
 
 
216 aa  237  2e-61  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  59.45 
 
 
222 aa  237  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  58.99 
 
 
218 aa  235  6e-61  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  58.41 
 
 
228 aa  235  6e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  58.99 
 
 
221 aa  233  2.0000000000000002e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  60.65 
 
 
222 aa  233  4.0000000000000004e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  54.32 
 
 
239 aa  232  6e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  59.43 
 
 
220 aa  232  6e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  55.06 
 
 
241 aa  232  7.000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  56.88 
 
 
225 aa  231  1e-59  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  58.72 
 
 
224 aa  231  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  56.94 
 
 
218 aa  230  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  62.1 
 
 
221 aa  230  3e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  60 
 
 
218 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  60.83 
 
 
215 aa  229  5e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  57.53 
 
 
224 aa  229  5e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  59.43 
 
 
217 aa  228  6e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  57.87 
 
 
234 aa  228  7e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  58.49 
 
 
221 aa  228  9e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  57.78 
 
 
223 aa  228  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  59.36 
 
 
224 aa  227  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.21 
 
 
226 aa  227  2e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  59.28 
 
 
226 aa  226  3e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.01 
 
 
225 aa  226  3e-58  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  56.65 
 
 
227 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  55.71 
 
 
224 aa  224  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  59.17 
 
 
226 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  56.68 
 
 
219 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  56.76 
 
 
241 aa  223  3e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  55.41 
 
 
235 aa  223  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  54.5 
 
 
218 aa  223  4e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  59.35 
 
 
217 aa  222  6e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  55.66 
 
 
227 aa  222  7e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  58.41 
 
 
217 aa  221  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  57.41 
 
 
215 aa  221  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.87 
 
 
220 aa  221  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  56.68 
 
 
221 aa  221  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  55.16 
 
 
225 aa  220  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  54.78 
 
 
231 aa  220  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  56.94 
 
 
221 aa  220  3e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  57.34 
 
 
223 aa  219  3e-56  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  57.34 
 
 
219 aa  219  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  56.36 
 
 
219 aa  219  6e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.01 
 
 
222 aa  218  7e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  56.07 
 
 
219 aa  218  7.999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  56.68 
 
 
221 aa  218  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  56.05 
 
 
226 aa  218  1e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  56.28 
 
 
220 aa  217  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  54.91 
 
 
228 aa  217  2e-55  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  54.02 
 
 
226 aa  217  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  60.09 
 
 
224 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  55.41 
 
 
225 aa  216  2.9999999999999998e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  58.37 
 
 
226 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.74 
 
 
222 aa  216  4e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  54.75 
 
 
224 aa  216  4e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  50.62 
 
 
248 aa  216  4e-55  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  55.5 
 
 
220 aa  216  5e-55  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  56.62 
 
 
223 aa  216  5e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.36 
 
 
226 aa  215  5.9999999999999996e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  55.76 
 
 
219 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  57.66 
 
 
224 aa  214  9.999999999999999e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.25 
 
 
261 aa  214  1.9999999999999998e-54  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  55.56 
 
 
232 aa  214  1.9999999999999998e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  55.95 
 
 
230 aa  213  2.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  58.02 
 
 
214 aa  213  2.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  55.56 
 
 
217 aa  213  2.9999999999999995e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  55.96 
 
 
224 aa  212  5.999999999999999e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  56.22 
 
 
221 aa  212  7e-54  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  57.55 
 
 
211 aa  211  9e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.46 
 
 
234 aa  210  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  53.15 
 
 
223 aa  210  3e-53  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  55.05 
 
 
226 aa  209  4e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.36 
 
 
244 aa  209  4e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  54.21 
 
 
217 aa  209  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  50.66 
 
 
233 aa  209  5e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  56.11 
 
 
225 aa  209  6e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  54.26 
 
 
228 aa  209  6e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53.74 
 
 
220 aa  208  9e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.3 
 
 
215 aa  208  1e-52  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.63 
 
 
225 aa  208  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  57.99 
 
 
220 aa  208  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  52.14 
 
 
242 aa  207  2e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  53.07 
 
 
227 aa  207  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  53.36 
 
 
226 aa  206  3e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  53.15 
 
 
230 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.04 
 
 
230 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  56.6 
 
 
215 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.91 
 
 
230 aa  207  3e-52  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.85 
 
 
229 aa  207  3e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  53.95 
 
 
220 aa  206  5e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  54.21 
 
 
225 aa  205  7e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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