| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4051 |
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| Symbol | |
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| ID | 8328244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 4763398 |
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| End bp | 4764075 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644944521 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003101758 |
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| Protein GI | 256378098 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00308286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTTG TCGGACGACC GGTGCGGGTG GTCATCGTGG ACGACCAGCC GTTGATCCGG
GCCGGTCTGG GCATGGTGCT CGGGGCGCAG GAGGACATCG AGGTCGTCGG CGAGGCCGAG
GACGGGGCGC GGGCGCTGGA GGTGCTGAGC GCGGTCCGGG CCGACGTGGT GATCATGGAC
ATCCGGATGC CGGTGCTGGA CGGGGTGGAG GCGACCCGCA GGCTGTCCGC CCTGCCCGAT
TCGCCGAAGG TGCTGGTGCT GACCACGTTC GACACCGACG AGGACGCGTT CGCGGCGCTG
CGGGCCGGGG CCAGCGGGTT CCTGCTGAAG AACTCGCCCC CGGAGGACAC GCTGAACGCG
ATCAGGGTCA TCGCGGCCGG TGACGCGGTG GTCGCGCCTC GGGTGACGCG GCGGCTGCTC
GACCGGTTCG CCGGGCGGCT CGACACCGCC CCGGCGCCCG CGGACGACCG GCTCGACGTG
TTGACCGAGC GCGAGCGGGA GGTGCTGGTG CTGGTGGCGC GCGGGCTGTC CAACGTGGAG
CTGGCGGAGC GGATGCACGT GGCCGAGGCG ACCGTGAAGA CGCACCTGGG GCGGGTGCTG
ACCAAGCTCG GGCTGCGCGA CCGGGTCCAG GCCGTGGTGC TGGCCTACGA GCTGGGGCTG
GTGCGGCCGG GGGAGTGA
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| Protein sequence | MSVVGRPVRV VIVDDQPLIR AGLGMVLGAQ EDIEVVGEAE DGARALEVLS AVRADVVIMD
IRMPVLDGVE ATRRLSALPD SPKVLVLTTF DTDEDAFAAL RAGASGFLLK NSPPEDTLNA
IRVIAAGDAV VAPRVTRRLL DRFAGRLDTA PAPADDRLDV LTEREREVLV LVARGLSNVE
LAERMHVAEA TVKTHLGRVL TKLGLRDRVQ AVVLAYELGL VRPGE
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