More than 300 homologs were found in PanDaTox collection
for query gene Caci_1616 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_1616  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  438  9.999999999999999e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0231149  normal  0.0629914 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  61.23 
 
 
241 aa  254  8e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  61.26 
 
 
225 aa  247  1e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  57.4 
 
 
235 aa  239  4e-62  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.96 
 
 
221 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  56.95 
 
 
226 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  54.46 
 
 
228 aa  224  8e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  52.65 
 
 
221 aa  223  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.15 
 
 
226 aa  224  1e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  57.27 
 
 
221 aa  223  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  53.54 
 
 
224 aa  222  4.9999999999999996e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.56 
 
 
222 aa  220  9.999999999999999e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.84 
 
 
227 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  56.39 
 
 
222 aa  219  3e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  51.34 
 
 
220 aa  218  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  54.67 
 
 
225 aa  218  6e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.51 
 
 
226 aa  217  1e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.89 
 
 
225 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.46 
 
 
215 aa  214  8e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.3 
 
 
224 aa  214  9e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  54.67 
 
 
302 aa  213  9.999999999999999e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.57 
 
 
219 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.26 
 
 
234 aa  213  1.9999999999999998e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.11 
 
 
218 aa  209  2e-53  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  54.02 
 
 
222 aa  209  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.3 
 
 
247 aa  209  4e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  52 
 
 
219 aa  209  4e-53  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.42 
 
 
261 aa  208  5e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.1 
 
 
218 aa  208  6e-53  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.45 
 
 
221 aa  208  6e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  52.23 
 
 
226 aa  208  6e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.12 
 
 
215 aa  208  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  51.1 
 
 
225 aa  207  8e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  52.44 
 
 
229 aa  207  8e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.92 
 
 
250 aa  207  1e-52  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  48.44 
 
 
224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  51.77 
 
 
227 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  51.12 
 
 
221 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.33 
 
 
220 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.44 
 
 
224 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.31 
 
 
224 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.78 
 
 
239 aa  207  2e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  53.12 
 
 
223 aa  206  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  51.56 
 
 
221 aa  206  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  50.89 
 
 
230 aa  205  4e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  51.56 
 
 
217 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  51.57 
 
 
216 aa  205  5e-52  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.57 
 
 
221 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  52.94 
 
 
223 aa  204  6e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.89 
 
 
228 aa  204  6e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.36 
 
 
234 aa  204  8e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.34 
 
 
225 aa  204  9e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50.43 
 
 
234 aa  204  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  53.57 
 
 
225 aa  204  1e-51  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.98 
 
 
229 aa  204  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.45 
 
 
219 aa  204  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.44 
 
 
234 aa  202  3e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  50.44 
 
 
232 aa  202  3e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  52.42 
 
 
226 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.86 
 
 
227 aa  201  6e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  51.35 
 
 
223 aa  201  6e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.89 
 
 
217 aa  201  9.999999999999999e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.34 
 
 
220 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  50.45 
 
 
219 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  48.9 
 
 
224 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.44 
 
 
220 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  51.58 
 
 
214 aa  198  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  198  5e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  51.49 
 
 
244 aa  198  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  49.56 
 
 
226 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  50.22 
 
 
231 aa  198  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  51.13 
 
 
211 aa  198  7e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50 
 
 
230 aa  197  7.999999999999999e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  52.89 
 
 
241 aa  197  9e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52 
 
 
219 aa  197  1.0000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  50.45 
 
 
230 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.12 
 
 
214 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  51.77 
 
 
230 aa  196  3e-49  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  48 
 
 
225 aa  196  3e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  51.79 
 
 
220 aa  196  3e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  50 
 
 
217 aa  195  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  195  5.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  48.02 
 
 
233 aa  195  5.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  49.32 
 
 
223 aa  195  6e-49  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  47.39 
 
 
226 aa  194  7e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  49.35 
 
 
235 aa  194  9e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  52.73 
 
 
224 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  49.78 
 
 
222 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  46.93 
 
 
225 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  48.23 
 
 
228 aa  193  2e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  50 
 
 
217 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  54.5 
 
 
217 aa  192  3e-48  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  48.42 
 
 
239 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  45.58 
 
 
221 aa  192  4e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  47.81 
 
 
231 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  50.22 
 
 
221 aa  192  5e-48  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.66 
 
 
244 aa  192  5e-48  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  50 
 
 
230 aa  191  7e-48  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
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