Gene Snas_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4479 
Symbol 
ID8885684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4775978 
End bp4776652 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003513217 
Protein GI291301939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.518456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.598935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG ACAAGCCCAT CAAGGTTCTG CTCGTCGACG ACCAGCCGCT GCTGCGCACC 
GGGTTCCGGA TGGTGCTGGG GGCCGAGGCC GACATCGACA TCATCGCCGA GGCCGGTGAC
GGCGTAGAGG CCGTCGACCT GGCGCGGCGA CTGCTTCCCG ACGTGGTCCT CATGGACATC
CGGATGCCCC GCATGGACGG GGTCGCGGCC ACCAAGGCCA TCGTCGAGGC GAAACTGCCG
GTGCGGGTGC TGATCCTGAC CACCTTCGAC CTGGACGAGT ACGTGGTGGG CGCGCTGCGC
GCCGGAGCCG CCGGGTTCCT GGCCAAGGAC GTCCCCGCCG AGGACCTGGT CGCGGCGATC
CGTTCGGTGT CGTCCGGCGA GGCGGTCGTG GCGCCGAGGA TCCTGCGGCG GCTGCTGGAG
AAGTTCGTCG ACCGGCTGCC CGAACCCGAC GGCGCCACCC CGGCCAGCCT CGAGGTGCTG
ACCGAACGGG AGCGCGAGGT GCTGATCCTG GTGGCCAAGG GCATGTCCAA CACCGAAATC
GCCAAAGAGC TGACGGTCAG TGAGACGACG GTGAAGACTC ATGTCGGGCA CGTGCTGACC
AAGCTGGGCG TGCGGGACCG GGTGCAGGCC GTGGTGCTGG CGTATGAGAC CGGGCTGGTA
AAGCCCAGTA GGTGA
 
Protein sequence
MSTDKPIKVL LVDDQPLLRT GFRMVLGAEA DIDIIAEAGD GVEAVDLARR LLPDVVLMDI 
RMPRMDGVAA TKAIVEAKLP VRVLILTTFD LDEYVVGALR AGAAGFLAKD VPAEDLVAAI
RSVSSGEAVV APRILRRLLE KFVDRLPEPD GATPASLEVL TEREREVLIL VAKGMSNTEI
AKELTVSETT VKTHVGHVLT KLGVRDRVQA VVLAYETGLV KPSR