Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4479 |
Symbol | |
ID | 8885684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4775978 |
End bp | 4776652 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003513217 |
Protein GI | 291301939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.518456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.598935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCG ACAAGCCCAT CAAGGTTCTG CTCGTCGACG ACCAGCCGCT GCTGCGCACC GGGTTCCGGA TGGTGCTGGG GGCCGAGGCC GACATCGACA TCATCGCCGA GGCCGGTGAC GGCGTAGAGG CCGTCGACCT GGCGCGGCGA CTGCTTCCCG ACGTGGTCCT CATGGACATC CGGATGCCCC GCATGGACGG GGTCGCGGCC ACCAAGGCCA TCGTCGAGGC GAAACTGCCG GTGCGGGTGC TGATCCTGAC CACCTTCGAC CTGGACGAGT ACGTGGTGGG CGCGCTGCGC GCCGGAGCCG CCGGGTTCCT GGCCAAGGAC GTCCCCGCCG AGGACCTGGT CGCGGCGATC CGTTCGGTGT CGTCCGGCGA GGCGGTCGTG GCGCCGAGGA TCCTGCGGCG GCTGCTGGAG AAGTTCGTCG ACCGGCTGCC CGAACCCGAC GGCGCCACCC CGGCCAGCCT CGAGGTGCTG ACCGAACGGG AGCGCGAGGT GCTGATCCTG GTGGCCAAGG GCATGTCCAA CACCGAAATC GCCAAAGAGC TGACGGTCAG TGAGACGACG GTGAAGACTC ATGTCGGGCA CGTGCTGACC AAGCTGGGCG TGCGGGACCG GGTGCAGGCC GTGGTGCTGG CGTATGAGAC CGGGCTGGTA AAGCCCAGTA GGTGA
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Protein sequence | MSTDKPIKVL LVDDQPLLRT GFRMVLGAEA DIDIIAEAGD GVEAVDLARR LLPDVVLMDI RMPRMDGVAA TKAIVEAKLP VRVLILTTFD LDEYVVGALR AGAAGFLAKD VPAEDLVAAI RSVSSGEAVV APRILRRLLE KFVDRLPEPD GATPASLEVL TEREREVLIL VAKGMSNTEI AKELTVSETT VKTHVGHVLT KLGVRDRVQA VVLAYETGLV KPSR
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