| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8900 |
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| Symbol | |
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| ID | 8340293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10311280 |
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| End bp | 10311945 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644961990 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003119554 |
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| Protein GI | 256397990 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.967084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCATCC GGGTCCTGAT CGCCGACGAC CAGGCGATGG TCCGTGCCGG GTTCGGCGCG
CTGCTGGCGG CGCAGCCCGA CATCGAGGTG GTCGGGGACG CCGCCGACGG CGCGCAGGCG
CTCGCCGAGG CGGCCGCGCA CCAGCCGGAC GTGGTGCTGA TGGACGTGCG GATGCCGGTG
ATGGACGGCC TGGAGGCCGC GCGGCGCATC CTCGCCGGCG CCCCCGAGCG GCCCAGGATC
CTGATGCTGA CCACGTTCGA CCTCGACGAC TACGTCTACG CCGCGCTGCG CGCCGGCGCC
AGCGGCTTCC TGCTCAAGGA CGCCCCGGCG GCGGAGCTGG TCCATGCCGT CCGGGTGGTC
GCCGCCGGGG ACGCGCTGCT GGCGCCGTCG GTGACCCGCC GGCTGATCGC GGACTTCGCC
GCCCGGCGCC CCGCCGACCA GTCCGGACCG GTCGCCGTCG CGGCCCTGAC CCCGCGCGAG
CTCGACGTCC TGCGGCTGAT CGCCCGCGGG CTGTCGAACC AGGAGATCGC CGGCGAGCTG
GTGCTGGCCG AGCAGACGGT GAAGACGCAC GTCTCGCGGA TCCTGGCCAA GACCGGGCTG
CGGGACCGGG CTCAGGCGGT GGTGCTGGCC TACGAATCGG GGCTGGTGAC GGCGAACAGC
CGATGA
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| Protein sequence | MSIRVLIADD QAMVRAGFGA LLAAQPDIEV VGDAADGAQA LAEAAAHQPD VVLMDVRMPV
MDGLEAARRI LAGAPERPRI LMLTTFDLDD YVYAALRAGA SGFLLKDAPA AELVHAVRVV
AAGDALLAPS VTRRLIADFA ARRPADQSGP VAVAALTPRE LDVLRLIARG LSNQEIAGEL
VLAEQTVKTH VSRILAKTGL RDRAQAVVLA YESGLVTANS R
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