Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4946 |
Symbol | |
ID | 8886153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5255367 |
End bp | 5256041 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003513680 |
Protein GI | 291302402 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACG TGATCCGGGT ACTGCTGGCC GACGACCAGG CACTGGTGCG CGCGGGTTTC CGGGCCCTGC TGGACTCCTG CGACGACATC TCGGTGGTCG GCGAGGCCAA CGACGGCGAG GAGGCGTTCC GCCTCATCCG CGACATGGTT CCCGACGTGG TCCTGATGGA CATCCGGATG CCGGGCCTGG ACGGGCTCGC GGCCACCGCG AAGATCACCG CCGAGGCGTC GCTGACCAGC GTCCGCATCA TCATCCTGAC GACCTTCGAC CTCGACGAGT ACGTCTTCGA GGCGCTGCGC TCGGGCGCCA GCGGCTTCCT CGTCAAGGAC ACCGAACCGG TGGAACTGCT GCAGGCGGTG CGGGTGGTGG CGCGCGGCGA CGCGCTGCTG TCGCCCGGCG TCACCCGACG GCTGGTCGCC GAGTTCGCGC AGCGCGCGAA GGAACCGGTG TCGGCCAAGA AACTGGAGCA GCTGACCGAA CGCGAGCGCG AAGTGGTGGC GCTGGCCGGA ACCGGCCTGT CCAATGAGGA GATCGGCGCG AAGCTGTTCC TCAGTCCCGC CACCGCCAAG ACCCACATCA GCCGGGCCAT GATCAAGCTC GGCGCCCGCG ACCGGGCCCA GCTGGTGGTG TTCGCCTACG AGTCCGGCCT GGTGCGTCCG GGCTGGCTGG GGTGA
|
Protein sequence | MSDVIRVLLA DDQALVRAGF RALLDSCDDI SVVGEANDGE EAFRLIRDMV PDVVLMDIRM PGLDGLAATA KITAEASLTS VRIIILTTFD LDEYVFEALR SGASGFLVKD TEPVELLQAV RVVARGDALL SPGVTRRLVA EFAQRAKEPV SAKKLEQLTE REREVVALAG TGLSNEEIGA KLFLSPATAK THISRAMIKL GARDRAQLVV FAYESGLVRP GWLG
|
| |