More than 300 homologs were found in PanDaTox collection
for query gene Bfae_20460 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
229 aa  446  1.0000000000000001e-124  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  69.06 
 
 
231 aa  298  5e-80  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  67.37 
 
 
236 aa  289  3e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  65.94 
 
 
234 aa  277  9e-74  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  66.52 
 
 
239 aa  273  2.0000000000000002e-72  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  60.35 
 
 
233 aa  261  8.999999999999999e-69  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  61.86 
 
 
242 aa  258  6e-68  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  65.61 
 
 
225 aa  257  1e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  61.6 
 
 
249 aa  254  7e-67  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.74 
 
 
226 aa  253  2.0000000000000002e-66  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  61.19 
 
 
221 aa  251  7e-66  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  60.09 
 
 
227 aa  249  2e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  60.47 
 
 
213 aa  249  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.67 
 
 
230 aa  248  5e-65  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  57.85 
 
 
226 aa  248  6e-65  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.09 
 
 
244 aa  248  7e-65  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  59.36 
 
 
239 aa  244  6e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  50.59 
 
 
261 aa  244  9e-64  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  57.14 
 
 
224 aa  243  1.9999999999999999e-63  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  59.11 
 
 
225 aa  242  3e-63  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  57.53 
 
 
218 aa  241  7e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  62.33 
 
 
217 aa  238  5.999999999999999e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  57.08 
 
 
225 aa  233  1.0000000000000001e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  54.5 
 
 
223 aa  230  2e-59  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  56.7 
 
 
222 aa  228  6e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  56.16 
 
 
222 aa  227  1e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  52.65 
 
 
248 aa  227  1e-58  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  58.82 
 
 
220 aa  227  1e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  51.61 
 
 
224 aa  225  5.0000000000000005e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  55.71 
 
 
225 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  55.96 
 
 
220 aa  224  1e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  50.61 
 
 
250 aa  223  2e-57  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  60.75 
 
 
216 aa  223  2e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  55.91 
 
 
224 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  53.3 
 
 
228 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  55.51 
 
 
225 aa  221  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  54.55 
 
 
230 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  53.02 
 
 
234 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.38 
 
 
226 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.75 
 
 
221 aa  220  1.9999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.91 
 
 
220 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  54.42 
 
 
230 aa  219  3e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.95 
 
 
230 aa  218  7e-56  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.09 
 
 
239 aa  218  7.999999999999999e-56  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  54.34 
 
 
218 aa  218  7.999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  56.22 
 
 
221 aa  217  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  53.81 
 
 
225 aa  218  8.999999999999998e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.3 
 
 
229 aa  216  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.05 
 
 
226 aa  216  2e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  51.6 
 
 
221 aa  216  2e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  53.57 
 
 
234 aa  216  2.9999999999999998e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  52.49 
 
 
228 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  54.19 
 
 
230 aa  215  4e-55  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  52.89 
 
 
227 aa  215  4e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.02 
 
 
241 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  53.85 
 
 
226 aa  214  5.9999999999999996e-55  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  51.35 
 
 
222 aa  214  9e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.7 
 
 
225 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  52.91 
 
 
221 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.07 
 
 
217 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  54.3 
 
 
241 aa  214  9.999999999999999e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  56.76 
 
 
224 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  52.97 
 
 
222 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.15 
 
 
247 aa  212  2.9999999999999995e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  53.65 
 
 
235 aa  213  2.9999999999999995e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  56.16 
 
 
215 aa  212  3.9999999999999995e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.25 
 
 
215 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.69 
 
 
261 aa  211  7e-54  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.42 
 
 
225 aa  211  7e-54  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  52.65 
 
 
226 aa  211  7.999999999999999e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  55.96 
 
 
217 aa  211  9e-54  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  53.78 
 
 
230 aa  210  1e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  56.62 
 
 
214 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  52.47 
 
 
228 aa  210  2e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  210  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  53.21 
 
 
220 aa  210  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  54.46 
 
 
224 aa  209  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  53.39 
 
 
227 aa  210  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  50.67 
 
 
226 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  51.13 
 
 
223 aa  208  5e-53  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.7 
 
 
225 aa  207  8e-53  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  50.68 
 
 
225 aa  207  8e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  53.6 
 
 
225 aa  207  9e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  50.23 
 
 
221 aa  207  1e-52  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50.23 
 
 
221 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50.86 
 
 
228 aa  206  2e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.85 
 
 
234 aa  206  2e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  54.09 
 
 
230 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  47.56 
 
 
230 aa  206  3e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  47.95 
 
 
233 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  56.95 
 
 
218 aa  205  4e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.352272 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  50.23 
 
 
226 aa  205  5e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  51.1 
 
 
232 aa  205  5e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.45 
 
 
221 aa  205  6e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  50.64 
 
 
244 aa  204  8e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.2 
 
 
258 aa  204  9e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.85 
 
 
222 aa  204  9e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  54.02 
 
 
223 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  48.4 
 
 
226 aa  204  1e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.21 
 
 
219 aa  204  1e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
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