More than 300 homologs were found in PanDaTox collection
for query gene Namu_4067 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  100 
 
 		 218 aa  419  1e-116  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.352272 
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  59.05 
 
 		 212 aa  257  9e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  59.62 
 
 		 239 aa  240  1e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  60 
 
 		 234 aa  238  5e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.11 
 
 		 236 aa  234  1.0000000000000001e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  57.21 
 
 		 233 aa  233  2.0000000000000002e-60  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  57.71 
 
 		 231 aa  231  4.0000000000000004e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  61.57 
 
 		 225 aa  229  2e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.04 
 
 		 229 aa  226  2e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.9 
 
 		 230 aa  225  3e-58  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  56.82 
 
 		 225 aa  225  4e-58  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  57.75 
 
 		 221 aa  225  4e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  57.69 
 
 		 239 aa  224  8e-58  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  53.67 
 
 		 226 aa  221  6e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.26 
 
 		 258 aa  221  9e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.89 
 
 		 217 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  55.45 
 
 		 220 aa  220  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.05 
 
 		 227 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  57.21 
 
 		 224 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.88 
 
 		 225 aa  218  6e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  57.28 
 
 		 213 aa  218  7e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  55.92 
 
 		 218 aa  217  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  57.94 
 
 		 222 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  54.25 
 
 		 218 aa  216  2e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  55.11 
 
 		 230 aa  214  9e-55  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.93 
 
 		 220 aa  213  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_008699  Noca_3488  response regulator receiver  57.08 
 
 		 229 aa  214  9.999999999999999e-55  Nocardioides sp. JS614  Bacteria  normal  0.920048  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.11 
 
 		 244 aa  213  9.999999999999999e-55  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  58.22 
 
 		 249 aa  213  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  56.07 
 
 		 234 aa  212  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  53.52 
 
 		 230 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  44.98 
 
 		 261 aa  213  2.9999999999999995e-54  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.46 
 
 		 226 aa  212  3.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  55.56 
 
 		 223 aa  212  3.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  53.54 
 
 		 234 aa  211  5.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.46 
 
 		 219 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.46 
 
 		 220 aa  211  1e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.33 
 
 		 230 aa  209  3e-53  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  56.54 
 
 		 220 aa  209  3e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.14 
 
 		 222 aa  208  4e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  53.99 
 
 		 221 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  54.76 
 
 		 211 aa  208  6e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  57.27 
 
 		 242 aa  208  6e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.55 
 
 		 225 aa  207  9e-53  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  54.59 
 
 		 226 aa  207  9e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  53.95 
 
 		 244 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal  1 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  55.92 
 
 		 220 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  51.66 
 
 		 215 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.74 
 
 		 226 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.11 
 
 		 224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.38 
 
 		 234 aa  206  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  54.46 
 
 		 221 aa  206  2e-52  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  55.81 
 
 		 224 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.08 
 
 		 215 aa  206  2e-52  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.67 
 
 		 219 aa  206  2e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  56.07 
 
 		 216 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.09 
 
 		 215 aa  206  3e-52  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.74 
 
 		 220 aa  206  3e-52  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  53.05 
 
 		 225 aa  205  4e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  55.4 
 
 		 241 aa  205  5e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  53.3 
 
 		 214 aa  204  6e-52  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  52.31 
 
 		 230 aa  204  6e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.92 
 
 		 222 aa  204  6e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.9 
 
 		 218 aa  204  7e-52  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  52.78 
 
 		 221 aa  204  8e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.91 
 
 		 223 aa  204  8e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  54.21 
 
 		 221 aa  204  9e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  52.09 
 
 		 224 aa  203  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  54.13 
 
 		 227 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  55.61 
 
 		 221 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  54.13 
 
 		 224 aa  202  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  55.61 
 
 		 222 aa  203  2e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.52 
 
 		 219 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  55.5 
 
 		 223 aa  202  4e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  54.13 
 
 		 225 aa  201  5e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.18 
 
 		 225 aa  201  5e-51  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  54.72 
 
 		 225 aa  201  8e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  52.94 
 
 		 232 aa  200  9.999999999999999e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  53.27 
 
 		 226 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.25 
 
 		 215 aa  199  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  54.29 
 
 		 216 aa  200  1.9999999999999998e-50  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.29 
 
 		 226 aa  199  1.9999999999999998e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50 
 
 		 225 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  50.93 
 
 		 219 aa  199  3.9999999999999996e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  52.34 
 
 		 225 aa  198  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  52.56 
 
 		 223 aa  198  6e-50  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal  1 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  52.21 
 
 		 228 aa  198  6e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  54.93 
 
 		 219 aa  198  6e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  51.64 
 
 		 217 aa  197  7.999999999999999e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  50.94 
 
 		 218 aa  197  9e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.68 
 
 		 229 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.87 
 
 		 228 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  51.61 
 
 		 224 aa  196  2.0000000000000003e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  54.46 
 
 		 247 aa  196  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  50.93 
 
 		 249 aa  196  3e-49  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.23 
 
 		 217 aa  196  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.31 
 
 		 250 aa  195  4.0000000000000005e-49  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50.94 
 
 		 218 aa  195  4.0000000000000005e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  59.33 
 
 		 217 aa  194  6e-49  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  50.94 
 
 		 215 aa  194  6e-49  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.100644 
 
 
-
 
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