More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0236 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  100 
 
 		 224 aa  426  1e-118  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  61.01 
 
 		 214 aa  238  5e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.14 
 
 		 227 aa  235  5.0000000000000005e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.59 
 
 		 226 aa  231  6e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  60.73 
 
 		 213 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  57.73 
 
 		 216 aa  223  2e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal  1 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  55.31 
 
 		 234 aa  223  2e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  55.86 
 
 		 226 aa  222  4e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  58.45 
 
 		 218 aa  220  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  57.01 
 
 		 223 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  52.73 
 
 		 244 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  56.31 
 
 		 225 aa  213  2.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.16 
 
 		 226 aa  211  4.9999999999999996e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  56.19 
 
 		 229 aa  211  7e-54  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  55.56 
 
 		 234 aa  211  7.999999999999999e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.84 
 
 		 227 aa  210  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  48.91 
 
 		 233 aa  210  1e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.53 
 
 		 236 aa  210  1e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.16 
 
 		 230 aa  210  1e-53  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.46 
 
 		 229 aa  209  2e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  57.33 
 
 		 215 aa  210  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.12 
 
 		 231 aa  210  2e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  50.65 
 
 		 242 aa  208  4e-53  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.89 
 
 		 225 aa  208  6e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  57.26 
 
 		 239 aa  207  9e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.67 
 
 		 225 aa  207  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  55.2 
 
 		 226 aa  206  2e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.45 
 
 		 239 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.57 
 
 		 239 aa  206  3e-52  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  52.04 
 
 		 218 aa  206  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50 
 
 		 215 aa  205  4e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  52.91 
 
 		 223 aa  205  4e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.57 
 
 		 230 aa  205  5e-52  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  51.13 
 
 		 222 aa  205  6e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.27 
 
 		 218 aa  204  6e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  52.04 
 
 		 225 aa  204  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.71 
 
 		 220 aa  204  7e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  54.34 
 
 		 220 aa  204  7e-52  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  54.5 
 
 		 220 aa  204  1e-51  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  52.04 
 
 		 225 aa  202  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  53.3 
 
 		 230 aa  203  2e-51  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  52.04 
 
 		 225 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  49.33 
 
 		 224 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.05 
 
 		 219 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  51.14 
 
 		 224 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  53.33 
 
 		 219 aa  202  5e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50.68 
 
 		 225 aa  201  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  49.77 
 
 		 220 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  52.21 
 
 		 232 aa  201  8e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  53.42 
 
 		 224 aa  200  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.09 
 
 		 228 aa  200  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.21 
 
 		 221 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50 
 
 		 218 aa  198  6e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  50.92 
 
 		 223 aa  198  6e-50  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal  1 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  49.55 
 
 		 220 aa  197  9e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  48.2 
 
 		 224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  46.22 
 
 		 230 aa  197  1.0000000000000001e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  51.15 
 
 		 217 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.11 
 
 		 223 aa  197  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  53.21 
 
 		 221 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  51.58 
 
 		 221 aa  196  2.0000000000000003e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.36 
 
 		 225 aa  196  3e-49  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  54.5 
 
 		 219 aa  196  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.14 
 
 		 221 aa  196  3e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  51.13 
 
 		 230 aa  195  4.0000000000000005e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.61 
 
 		 215 aa  195  5.000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  46.88 
 
 		 241 aa  195  5.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  51.6 
 
 		 226 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  52.04 
 
 		 219 aa  194  7e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.67 
 
 		 228 aa  194  7e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  52.8 
 
 		 211 aa  194  8.000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  48.88 
 
 		 221 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  1 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  48.28 
 
 		 228 aa  194  1e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  50.45 
 
 		 221 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  52.29 
 
 		 220 aa  194  1e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  52.49 
 
 		 224 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  48.23 
 
 		 230 aa  193  2e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  53.6 
 
 		 230 aa  193  2e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.6 
 
 		 228 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  52.04 
 
 		 247 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  39.3 
 
 		 261 aa  192  3e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  53 
 
 		 215 aa  192  4e-48  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  52.31 
 
 		 215 aa  192  4e-48  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  50.44 
 
 		 236 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.22 
 
 		 228 aa  191  9e-48  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  52.29 
 
 		 211 aa  191  1e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.13 
 
 		 222 aa  191  1e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  49.3 
 
 		 213 aa  189  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.08 
 
 		 250 aa  189  2e-47  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  48.66 
 
 		 224 aa  190  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.8 
 
 		 225 aa  189  2.9999999999999997e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  49.77 
 
 		 219 aa  188  5e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal  1 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.77 
 
 		 230 aa  188  5.999999999999999e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.82 
 
 		 258 aa  188  7e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  52.34 
 
 		 217 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  52.86 
 
 		 234 aa  187  8e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  52.78 
 
 		 225 aa  187  8e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 		 244 aa  187  1e-46  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.89 
 
 		 222 aa  187  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50.23 
 
 		 223 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
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