Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7105 |
Symbol | |
ID | 8338472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8265378 |
End bp | 8266103 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960186 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003117776 |
Protein GI | 256396212 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.106023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.469545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCACG ACCCGATCAG CGCCCCGACC ACCGGACCGC ACCACCAGCG CGCCACGATC CGCGTGATCC TCGCCGACGA CCAGCCGCTG ATCCGCAGCG GCCTGCGGGT CCTGATCAAC GACGCGCCCG ACATCGAGGT CGTCGGCGAG GCCGGCACCG GCGCCGAGGC GGTCCGCCTG GCCGCCGCGC ACACCCCGGA CGTGGCGGTG ATGGACATCC GCATGCCGGA GATGGACGGC ATCGAGGCCA CCCGCCGCAT CACCGAGTCC TCCGACACCA CCCGCGTGGT CATGCTCACC ACCTTCGACG ACGACGAGTA CGTCTACGCG GCACTCCGCG CCGGCGCGAG CGGCTTCCTG GTCAAGGACA TGGCCCTGGA CTCGATCCTG GACGCCGTCC GCGTCACCGC CTCCGGCGAC GCGATCATCG CCCCGAGCGT CACCCGCAAA CTGATCGCCG AGTTCGCCAT CCGCCCCGAT CCCGGCGCCA CCGCCCCCCG CCGAGGCGAC AAGGCCCTCC TCGACGGCGT GACCGACCGC GAGCGCGAAG TCCTGACCCT CGTCGGCCGA GGCCTGTCCA ACGGCGAGAT CGCCGAAGAA CTCTTCATCA GCGCCGCCAC CGCCAAAGCC CACGTGGCCC GCCTGTTCAC CAAGCTCGGC GCCCGCGACC GCGTGCAACT GGTCATCACG GCGTACGAGG CGGGGCTGGT GGCGCCATCG CGGTGA
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Protein sequence | MTHDPISAPT TGPHHQRATI RVILADDQPL IRSGLRVLIN DAPDIEVVGE AGTGAEAVRL AAAHTPDVAV MDIRMPEMDG IEATRRITES SDTTRVVMLT TFDDDEYVYA ALRAGASGFL VKDMALDSIL DAVRVTASGD AIIAPSVTRK LIAEFAIRPD PGATAPRRGD KALLDGVTDR EREVLTLVGR GLSNGEIAEE LFISAATAKA HVARLFTKLG ARDRVQLVIT AYEAGLVAPS R
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