| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6529 |
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| Symbol | |
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| ID | 8337893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7526131 |
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| End bp | 7526805 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959625 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003117218 |
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| Protein GI | 256395654 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.270807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.114568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGGCG TAAGCGTGCT GCTGGCCGAC GACCAGCCCC TCTCGCGCCA CGGCCTCGCC
ATGATCCTCC AAGCCCAGGG AGACATCGAG GTCGTCGGTC AGGCGGCGGA CGGCGTCGAA
GCCGTAGAGC TGGCCGCCGC CCTCCAGCCC GCGATCGTGC TGATGGACGT GCGCATGCCC
CGGCTCGACG GCATCGCGGC CACCCGGCAG ATCATCGCTC GAGCGCTGCC CACGAGGGTC
ATCGTGCTCA CGACCTTCGA CCTCGACGAT TACGCCTTCG AGGCCCTGCG CGCCGGCGCG
AGCGGCTTCC TGTTGAAGAA CTCCAGGCCC GACGACCTCG CCGCCGCCAT CCGGGCGGTG
GCCGCGGGAG ACGCCGTGAT CGCCCCGTCC ACCACCAGGC GCCTGCTCGA CGCCTACGCC
GACCGGTTCA CCGCGCCGTC GGACCCTCCC GCCGGAGCAT CAGACCCCTC CGCGCCGCTT
GAGAGCCTGA CCCGCAGAGA GCGCGAGGTC TTCGATCAGA TGGTGTCCGG GCTGACCAAC
AAGGAGATCG CGCAGCAGTT GGCCCTCTCG GAGACCACCG TCAAGACCCA CGTCGTGCGC
ATCCTGGCCA AACTCGCCGT ACGAGACCGG GTCCAGGCCG TCATCTACGC CTACGAGACC
GGATACATCC ACTGA
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| Protein sequence | MTGVSVLLAD DQPLSRHGLA MILQAQGDIE VVGQAADGVE AVELAAALQP AIVLMDVRMP
RLDGIAATRQ IIARALPTRV IVLTTFDLDD YAFEALRAGA SGFLLKNSRP DDLAAAIRAV
AAGDAVIAPS TTRRLLDAYA DRFTAPSDPP AGASDPSAPL ESLTRREREV FDQMVSGLTN
KEIAQQLALS ETTVKTHVVR ILAKLAVRDR VQAVIYAYET GYIH
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