More than 300 homologs were found in PanDaTox collection
for query gene Gbro_4119 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_4119  response regulator receiver  100 
 
 
230 aa  453  1.0000000000000001e-126  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  60.44 
 
 
224 aa  259  3e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  61.54 
 
 
221 aa  258  4e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  60.36 
 
 
223 aa  258  6e-68  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  61.61 
 
 
232 aa  254  6e-67  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  61.09 
 
 
222 aa  253  1.0000000000000001e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  61.09 
 
 
221 aa  251  5.000000000000001e-66  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  64.71 
 
 
224 aa  249  2e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  58.59 
 
 
224 aa  248  4e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  61.54 
 
 
222 aa  247  1e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  61.09 
 
 
221 aa  244  6e-64  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  57.92 
 
 
225 aa  244  6e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  58.56 
 
 
217 aa  244  8e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  58.3 
 
 
220 aa  244  9e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  58.19 
 
 
244 aa  243  1.9999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  59.11 
 
 
226 aa  242  3e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  57.92 
 
 
215 aa  241  7e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  57.01 
 
 
233 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.92 
 
 
221 aa  240  2e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  58.9 
 
 
226 aa  239  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  56.19 
 
 
226 aa  239  2.9999999999999997e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  57.66 
 
 
223 aa  238  5.999999999999999e-62  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  56.83 
 
 
226 aa  238  6.999999999999999e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  58.37 
 
 
219 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  57.53 
 
 
226 aa  231  6e-60  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  56.25 
 
 
227 aa  231  7.000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  55.61 
 
 
224 aa  230  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  56.76 
 
 
218 aa  230  2e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  53.33 
 
 
228 aa  226  2e-58  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.33 
 
 
261 aa  225  4e-58  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  55.71 
 
 
215 aa  225  5.0000000000000005e-58  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  56.42 
 
 
214 aa  224  1e-57  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  54.55 
 
 
226 aa  224  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.35 
 
 
229 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.45 
 
 
222 aa  222  3e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.07 
 
 
219 aa  222  4e-57  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50.89 
 
 
219 aa  221  4.9999999999999996e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  54.5 
 
 
218 aa  221  6e-57  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  51.75 
 
 
220 aa  221  6e-57  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  55.16 
 
 
236 aa  221  6e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.75 
 
 
215 aa  221  7e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  56.36 
 
 
247 aa  221  9e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  52.17 
 
 
225 aa  221  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  53.39 
 
 
220 aa  220  1.9999999999999999e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  51.32 
 
 
234 aa  220  1.9999999999999999e-56  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  54.3 
 
 
225 aa  219  3e-56  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  51.54 
 
 
225 aa  218  3.9999999999999997e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  53.85 
 
 
221 aa  218  6e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  53.6 
 
 
225 aa  218  7.999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  54.5 
 
 
220 aa  218  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  54.71 
 
 
220 aa  217  1e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  51.34 
 
 
228 aa  217  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  53.6 
 
 
218 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.67 
 
 
223 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  53.81 
 
 
225 aa  215  4e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  53.6 
 
 
222 aa  215  4e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  56.31 
 
 
221 aa  215  5e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  54.5 
 
 
226 aa  215  5e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.89 
 
 
225 aa  214  5.9999999999999996e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.6 
 
 
221 aa  214  7e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.19 
 
 
241 aa  213  9.999999999999999e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  55.41 
 
 
217 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  51.61 
 
 
211 aa  213  1.9999999999999998e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.42 
 
 
220 aa  213  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  212  2.9999999999999995e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  56.11 
 
 
224 aa  212  2.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52 
 
 
224 aa  212  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  52 
 
 
222 aa  212  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  52.25 
 
 
221 aa  212  3.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  49.55 
 
 
219 aa  211  7e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  52.17 
 
 
225 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  48.55 
 
 
250 aa  209  3e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.02 
 
 
239 aa  209  3e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.7 
 
 
230 aa  208  4e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.46 
 
 
218 aa  208  5e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  52.21 
 
 
227 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50 
 
 
231 aa  207  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  49.11 
 
 
219 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  51.1 
 
 
221 aa  206  3e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.56 
 
 
229 aa  206  3e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  51.75 
 
 
225 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  51.13 
 
 
228 aa  206  4e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.71 
 
 
222 aa  205  4e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  46.84 
 
 
248 aa  205  5e-52  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  48.93 
 
 
234 aa  204  7e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  51.14 
 
 
217 aa  204  8e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.04 
 
 
223 aa  204  8e-52  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  47.96 
 
 
214 aa  204  9e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  52.7 
 
 
217 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  50.9 
 
 
230 aa  203  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  49.31 
 
 
230 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  50 
 
 
249 aa  202  3e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.21 
 
 
225 aa  202  4e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  48.48 
 
 
242 aa  202  4e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  40.08 
 
 
261 aa  202  4e-51  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  48.44 
 
 
225 aa  201  6e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.44 
 
 
234 aa  201  7e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  49.33 
 
 
226 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  53.6 
 
 
224 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  50.46 
 
 
214 aa  199  1.9999999999999998e-50  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>