More than 300 homologs were found in PanDaTox collection
for query gene Bfae_25060 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
222 aa  446  1.0000000000000001e-124  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  60.83 
 
 
230 aa  268  5e-71  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  53.46 
 
 
219 aa  233  1.0000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  54.21 
 
 
215 aa  231  8.000000000000001e-60  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  53.33 
 
 
214 aa  226  2e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  54.79 
 
 
219 aa  225  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  55.14 
 
 
222 aa  223  1e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  53.7 
 
 
220 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  53.99 
 
 
220 aa  219  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  52.09 
 
 
214 aa  218  3.9999999999999997e-56  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  53.05 
 
 
213 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  52.58 
 
 
221 aa  216  2e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.53 
 
 
215 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.83 
 
 
229 aa  216  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  51.39 
 
 
221 aa  215  5e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  51.61 
 
 
225 aa  215  5e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  52.8 
 
 
228 aa  215  5.9999999999999996e-55  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  49.07 
 
 
231 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  49.36 
 
 
250 aa  211  4.9999999999999996e-54  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.23 
 
 
226 aa  211  5.999999999999999e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  51.4 
 
 
215 aa  211  7.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.53 
 
 
221 aa  211  7.999999999999999e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  52.09 
 
 
225 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  49.53 
 
 
218 aa  210  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.53 
 
 
239 aa  210  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.56 
 
 
234 aa  209  2e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  50.92 
 
 
226 aa  209  2e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  51.64 
 
 
218 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.34 
 
 
215 aa  209  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  51.17 
 
 
220 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  49.54 
 
 
216 aa  209  4e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.61 
 
 
225 aa  208  6e-53  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  46.73 
 
 
220 aa  208  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  51.89 
 
 
227 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.92 
 
 
224 aa  207  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  50.23 
 
 
225 aa  207  8e-53  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.11 
 
 
218 aa  207  1e-52  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.66 
 
 
224 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  47.3 
 
 
223 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  50 
 
 
232 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.39 
 
 
220 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  47.71 
 
 
230 aa  205  3e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  49.77 
 
 
230 aa  206  3e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.25 
 
 
230 aa  205  4e-52  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.93 
 
 
225 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  50.94 
 
 
228 aa  205  5e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  48.83 
 
 
219 aa  204  6e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  53.3 
 
 
215 aa  204  7e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.15 
 
 
225 aa  204  9e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  48.05 
 
 
244 aa  204  9e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  48.84 
 
 
215 aa  203  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  49.54 
 
 
221 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.2 
 
 
226 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  45.16 
 
 
258 aa  203  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.33 
 
 
241 aa  204  1e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  50.93 
 
 
220 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50.23 
 
 
223 aa  203  2e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  49.07 
 
 
241 aa  202  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.93 
 
 
230 aa  203  2e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  51.64 
 
 
214 aa  202  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  48.39 
 
 
247 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  48.37 
 
 
217 aa  202  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.21 
 
 
244 aa  202  4e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  47.11 
 
 
228 aa  202  4e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  52.56 
 
 
245 aa  201  5e-51  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.6 
 
 
225 aa  201  7e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  47 
 
 
215 aa  201  8e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.100644 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.08 
 
 
227 aa  201  8e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  201  9e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  52.51 
 
 
232 aa  201  9e-51  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  200  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.63 
 
 
229 aa  200  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  51.67 
 
 
213 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  200  9.999999999999999e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.54 
 
 
221 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  49.09 
 
 
226 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.54 
 
 
221 aa  200  1.9999999999999998e-50  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.15 
 
 
222 aa  199  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  46.58 
 
 
234 aa  200  1.9999999999999998e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.77 
 
 
239 aa  199  1.9999999999999998e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  50.46 
 
 
222 aa  199  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  50 
 
 
217 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  47.44 
 
 
218 aa  199  3e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  51.39 
 
 
217 aa  199  3e-50  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  49.31 
 
 
218 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  48.36 
 
 
216 aa  199  3e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.62 
 
 
226 aa  199  3e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  50.23 
 
 
217 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  199  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  49.07 
 
 
225 aa  199  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  46.79 
 
 
228 aa  198  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  52.17 
 
 
209 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  48.11 
 
 
229 aa  197  7e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  47.58 
 
 
239 aa  197  9e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  47.66 
 
 
216 aa  197  1.0000000000000001e-49  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.85 
 
 
224 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.51 
 
 
226 aa  196  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.23 
 
 
224 aa  197  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
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