More than 300 homologs were found in PanDaTox collection
for query gene Snas_1960 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  422  1e-117  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  69.16 
 
 
221 aa  289  2e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  67.44 
 
 
218 aa  258  3e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  54.95 
 
 
219 aa  221  4.9999999999999996e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  55.35 
 
 
230 aa  219  3.9999999999999997e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.54 
 
 
222 aa  209  4e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  52.34 
 
 
215 aa  201  6e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  52.31 
 
 
228 aa  200  9.999999999999999e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  53.05 
 
 
215 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  53.24 
 
 
220 aa  195  5.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  51.17 
 
 
213 aa  194  6e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  51.82 
 
 
215 aa  194  8.000000000000001e-49  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  53.24 
 
 
227 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  51.85 
 
 
232 aa  191  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  51.83 
 
 
219 aa  189  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  49.3 
 
 
218 aa  189  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  51.89 
 
 
215 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.61 
 
 
216 aa  189  4e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  49.07 
 
 
222 aa  188  5.999999999999999e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  184  7e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  48.62 
 
 
215 aa  182  4.0000000000000006e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  47.62 
 
 
214 aa  181  7e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.95 
 
 
229 aa  180  2e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  49.54 
 
 
222 aa  179  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  47.22 
 
 
226 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  47.89 
 
 
212 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50.23 
 
 
222 aa  176  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47.93 
 
 
223 aa  176  3e-43  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  46.98 
 
 
225 aa  176  3e-43  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  49.08 
 
 
229 aa  175  5e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  45.54 
 
 
215 aa  175  5e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  175  6e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  50.47 
 
 
222 aa  174  7e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  47.39 
 
 
220 aa  174  9e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013947  Snas_2672  two component transcriptional regulator, LuxR family  48.15 
 
 
219 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.240505 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.33 
 
 
229 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  49.3 
 
 
221 aa  173  1.9999999999999998e-42  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  50 
 
 
217 aa  173  1.9999999999999998e-42  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  50.7 
 
 
245 aa  173  1.9999999999999998e-42  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  43.58 
 
 
226 aa  172  3.9999999999999995e-42  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  47.2 
 
 
225 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.54 
 
 
221 aa  171  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  46.48 
 
 
219 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.25 
 
 
218 aa  171  9e-42  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  47.22 
 
 
225 aa  171  9e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.01 
 
 
225 aa  171  9e-42  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.91 
 
 
225 aa  170  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.91 
 
 
239 aa  171  1e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  43.19 
 
 
230 aa  169  2e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  48.37 
 
 
217 aa  169  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  48.86 
 
 
220 aa  169  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  44.55 
 
 
231 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  46.26 
 
 
215 aa  169  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.66 
 
 
226 aa  169  3e-41  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  47.69 
 
 
220 aa  169  3e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  45.25 
 
 
226 aa  169  4e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  49.3 
 
 
214 aa  169  4e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  47.62 
 
 
221 aa  169  4e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  45.58 
 
 
224 aa  169  4e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.83 
 
 
241 aa  168  5e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  45.66 
 
 
225 aa  168  5e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  44.19 
 
 
224 aa  168  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  47.69 
 
 
218 aa  168  5e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.05 
 
 
224 aa  168  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  43.58 
 
 
226 aa  168  6e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  43.87 
 
 
220 aa  168  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  41.63 
 
 
225 aa  168  7e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  47.42 
 
 
225 aa  168  7e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  44.29 
 
 
229 aa  168  7e-41  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.42 
 
 
221 aa  167  8e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  47.93 
 
 
220 aa  167  9e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.6 
 
 
218 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  46.12 
 
 
225 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.17 
 
 
225 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  45.16 
 
 
221 aa  167  1e-40  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  47.93 
 
 
227 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  46.51 
 
 
229 aa  166  2e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.42 
 
 
215 aa  166  2e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.83 
 
 
228 aa  166  2e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.25 
 
 
226 aa  166  2.9999999999999998e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  42.99 
 
 
216 aa  166  2.9999999999999998e-40  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  48.11 
 
 
217 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.37 
 
 
224 aa  165  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  43.78 
 
 
241 aa  165  5.9999999999999996e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  45.05 
 
 
227 aa  165  5.9999999999999996e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  47.64 
 
 
220 aa  164  6.9999999999999995e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  45.28 
 
 
218 aa  164  9e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  43.66 
 
 
239 aa  164  1.0000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.07 
 
 
224 aa  164  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  47.17 
 
 
220 aa  163  2.0000000000000002e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  43.12 
 
 
228 aa  162  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.08 
 
 
236 aa  163  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47.89 
 
 
220 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  46.7 
 
 
213 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  43.72 
 
 
244 aa  162  3e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  47.93 
 
 
233 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  42.79 
 
 
225 aa  162  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  43.66 
 
 
212 aa  162  4.0000000000000004e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  47.47 
 
 
217 aa  162  5.0000000000000005e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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